RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TSNARE1Q96NA8 513 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 PRAP1Q96NZ9 151 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 NDC1Q9BTX1 674 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 PARD6BQ9BYG5 372 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 CUEDC1Q9NWM3 386 aaPredicted RBP24.67■■□□□ 1.54
TRIM28-204ENST00000594806 WWOXQ9NZC7 414 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 PTBP2Q9UKA9 531 aaKnown RBP24.67■■□□□ 1.54
TRIM28-204ENST00000594806 RAB21Q9UL25 225 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 DYRK1BQ9Y463 629 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 PTPRQQ9UMZ3 2332 aa24.67■■□□□ 1.54
TRIM28-204ENST00000594806 KCNE1BA0A087WTH5 132 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 TEX51A0A1B0GUA7 166 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 FITM1A5D6W6 292 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 MEN1O00255 615 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 RBP1P09455 135 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 RORAP35398 523 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 HSD17B3P37058 310 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 CCR8P51685 355 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 EMP3P54852 163 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 IRF9Q00978 393 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 CCDC81Q6ZN84 652 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 LCA5Q86VQ0 697 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 TDRPQ86YL5 185 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 ZNF655Q8N720 491 aaPredicted RBP24.66■■□□□ 1.54
TRIM28-204ENST00000594806 ZSCAN1Q8NBB4 408 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 RERGQ96A58 199 aaPredicted RBP24.66■■□□□ 1.54
TRIM28-204ENST00000594806 OR2A5Q96R48 311 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 OR4K3Q96R72 315 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 GPN2Q9H9Y4 310 aaPredicted RBP24.66■■□□□ 1.54
TRIM28-204ENST00000594806 KCND3Q9UK17 655 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 SLC22A14Q9Y267 594 aa24.66■■□□□ 1.54
TRIM28-204ENST00000594806 NCF1BA6NI72 391 aaPredicted RBP24.65■■□□□ 1.54
TRIM28-204ENST00000594806 NCF1CA8MVU1 366 aaPredicted RBP24.65■■□□□ 1.54
TRIM28-204ENST00000594806 C21orf140B9A014 251 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 NCF1P14598 390 aaPredicted RBP24.65■■□□□ 1.54
TRIM28-204ENST00000594806 AGXTP21549 392 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 GCGRP47871 477 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 KCNC1P48547 511 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 VSX2P58304 361 aaPredicted RBP24.65■■□□□ 1.54
TRIM28-204ENST00000594806 CSNK1G2P78368 415 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 GPS2Q13227 327 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 WASHC2DQ5SRD0 308 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 PRAMEF17Q5VTA0 474 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 TBC1D19Q8N5T2 526 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 SLC38A9Q8NBW4 561 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 OR4K1Q8NGD4 311 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 ACMSDQ8TDX5 336 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 SNRNP27Q8WVK2 155 aaKnown RBP24.65■■□□□ 1.54
TRIM28-204ENST00000594806 SLC5A11Q8WWX8 675 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 GPR78Q96P69 363 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 C17orf62Q9BQA9 187 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 SARGQ9BW04 601 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 TXLNGQ9NUQ3 528 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 PCMTD2Q9NV79 361 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 WDR70Q9NW82 654 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 GPRC5BQ9NZH0 403 aa24.65■■□□□ 1.54
TRIM28-204ENST00000594806 LOC101059948A0A1B0GTJ6 334 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 H0YGG7 62 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 STK16O75716 305 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 WDR47O94967 919 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 CDH1P12830 882 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 GMPRP36959 345 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 ARF3P61204 181 aaPredicted RBP24.64■■□□□ 1.54
TRIM28-204ENST00000594806 VAC14Q08AM6 782 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 FRMPD2BQ6IN97 320 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 MR1Q95460 341 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 GPR87Q9BY21 358 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 PELI2Q9HAT8 420 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 TMCO1Q9UM00 188 aa24.64■■□□□ 1.54
TRIM28-204ENST00000594806 CACNA1BQ00975 2339 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 LOC105369274A0A096LPK9 316 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 LOC102723532A0A0G2JNH3 316 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 SUPT3HB4E1H0 165 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 K7ENP7 123 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 HAT1O14929 419 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 TAPBPO15533 448 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 NRP2O60462 931 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 SUPT3HO75486 399 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 RFPL1O75677 317 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 NUDT17P0C025 328 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 LIFP15018 202 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 GNAZP19086 355 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 INO80CQ6PI98 192 aaPredicted RBP24.63■■□□□ 1.53
TRIM28-204ENST00000594806 VASH2Q86V25 355 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 OR4N4Q8N0Y3 316 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 NEIL2Q969S2 332 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 SLC45A3Q96JT2 553 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 TMEM79Q9BSE2 394 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 NLNQ9BYT8 704 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 DNAJC11Q9NVH1 559 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 CROTQ9UKG9 612 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 SH2B3Q9UQQ2 575 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 PCDHGA6Q9Y5G7 932 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 PKD1L2Q7Z442 2459 aa24.63■■□□□ 1.53
TRIM28-204ENST00000594806 MAP2K7O14733 419 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 CDH16O75309 829 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 SHBGP04278 402 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 CD63P08962 238 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 TCN2P20062 427 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 DLSTP36957 453 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms