RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TAP2Q03519 686 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 NKG7Q16617 165 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 PLEKHN1Q494U1 663 aaPredicted RBP12.6□□□□□ -0.39
H3F3B-213ENST00000593254 CYHR1Q6ZMK1 362 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 PCGF5Q86SE9 256 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 KCNMB4Q86W47 210 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 IQCKQ8N0W5 287 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 OR4N4Q8N0Y3 316 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 CLEC1AQ8NC01 280 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 ZNF480Q8WV37 535 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.6□□□□□ -0.39
H3F3B-213ENST00000593254 INPP5DQ92835 1189 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 EBNA1BP2Q99848 306 aaKnown RBP12.6□□□□□ -0.39
H3F3B-213ENST00000593254 PLCD4Q9BRC7 762 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 AARSD1Q9BTE6 412 aaKnown RBP12.6□□□□□ -0.39
H3F3B-213ENST00000593254 MRPS30Q9NP92 439 aaKnown RBP12.6□□□□□ -0.39
H3F3B-213ENST00000593254 IARS2Q9NSE4 1012 aaKnown RBP12.6□□□□□ -0.39
H3F3B-213ENST00000593254 ENTPD4Q9Y227 616 aa12.6□□□□□ -0.39
H3F3B-213ENST00000593254 HYKKA2RU49 373 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 BANF1O75531 89 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 TTC4O95801 387 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 MMP11P24347 488 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 RPA3P35244 121 aaPredicted RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 SKIV2L2P42285 1042 aaKnown RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 OR1D4P47884 311 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 SOX8P57073 446 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 TIAL1Q01085 375 aaKnown RBP eCLIP12.59□□□□□ -0.392e-8■□□□□ 9.1
H3F3B-213ENST00000593254 PRDX1Q06830 199 aaKnown RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 DHX9Q08211 1270 aaKnown RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 RAPSNQ13702 412 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 PRTGQ2VWP7 1150 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 MSS51Q4VC12 460 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 CRB2Q5IJ48 1285 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 VWA5B1Q5TIE3 1220 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 ICE2Q659A1 982 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 ZNF425Q6IV72 752 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 FBXO42Q6P3S6 717 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 PIWIL4Q7Z3Z4 852 aaKnown RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 PAQR7Q86WK9 346 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 CNTN4Q8IWV2 1026 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 LRRC56Q8IYG6 542 aaPredicted RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 CPNE9Q8IYJ1 553 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 GALNT16Q8N428 558 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 DTWD1Q8N5C7 304 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 C2CD4AQ8NCU7 369 aaPredicted RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 NAT9Q9BTE0 207 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 UNKQ9C0B0 810 aaKnown RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 C5AR2Q9P296 337 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 CTSFQ9UBX1 484 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 ZC3H7BQ9UGR2 993 aaKnown RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 TAC3Q9UHF0 121 aa12.59□□□□□ -0.39
H3F3B-213ENST00000593254 NXT1Q9UKK6 140 aaKnown RBP12.59□□□□□ -0.39
H3F3B-213ENST00000593254 VSTM2BA6NLU5 285 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 H0YGG7 62 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 AGPSO00116 658 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 ZBTB14O43829 449 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 VPS26AO75436 327 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 CCNDBP1O95273 360 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 ERVK-10P10266 1014 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 GABRB3P28472 473 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 IMPA1P29218 277 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 EMP3P54852 163 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 ARF3P61204 181 aaPredicted RBP12.58□□□□□ -0.4
H3F3B-213ENST00000593254 RELAQ04206 551 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
H3F3B-213ENST00000593254 MYBPC3Q14896 1274 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 MUM1Q2TAK8 710 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 SPANXN3Q5MJ09 141 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 LRRC8EQ6NSJ5 796 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 PRMT9Q6P2P2 845 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 CREG2Q8IUH2 290 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 IGDCC3Q8IVU1 814 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 CISD2Q8N5K1 135 aaKnown RBP12.58□□□□□ -0.4
H3F3B-213ENST00000593254 METTL27Q8N6F8 245 aaPredicted RBP12.58□□□□□ -0.4
H3F3B-213ENST00000593254 PPFIBP2Q8ND30 876 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 GABPB2Q8TAK5 448 aaPredicted RBP12.58□□□□□ -0.4
H3F3B-213ENST00000593254 PDLIM2Q96JY6 352 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 C10orf90Q96M02 699 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 SYNPO2LQ9H987 977 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 PLAC1Q9HBJ0 212 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 BOLA1Q9Y3E2 137 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 HS3ST3B1Q9Y662 390 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 MAU2Q9Y6X3 613 aa12.58□□□□□ -0.4
H3F3B-213ENST00000593254 MASP2O00187 686 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 SMAPO00193 183 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 SOCS6O14544 535 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 SYF2O95926 243 aaKnown RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 EIF2S1P05198 315 aaKnown RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 EZRP15311 586 aaKnown RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 ABATP80404 500 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 MORF4L2Q15014 288 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 BBS9Q3SYG4 887 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 UGT3A1Q6NUS8 523 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 KIAA0408Q6ZU52 694 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 SYDE1Q6ZW31 735 aaPredicted RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 UBE2R2Q712K3 238 aaPredicted RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 GALNT7Q86SF2 657 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 CERS2Q96G23 380 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 CAPZA3Q96KX2 299 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms