RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ZNF839A8K0R7 811 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 C9J4A7 227 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 H7BY64 318 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 PYCARD-AS1I3L0S3 204 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 SLC16A5O15375 505 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 PDGFAP04085 211 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 UMODP07911 640 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 HBQ1P09105 142 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 CDH1P12830 882 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 EZRP15311 586 aaKnown RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 GP5P40197 560 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 OR1D4P47884 311 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 PMS2P54278 862 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 DCDP81605 110 aaKnown RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 MEF2AQ02078 507 aaPredicted RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 GRM7Q14831 915 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 C18orf21Q32NC0 220 aaPredicted RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 MLIPQ5VWP3 458 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 MRPL14Q6P1L8 145 aaKnown RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 SHISA6Q6ZSJ9 500 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 C3orf62Q6ZUJ4 267 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 VN1R4Q7Z5H5 301 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 ADCK2Q7Z695 626 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 CMC1Q7Z7K0 106 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 MRGPREQ86SM8 312 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 CTAGE6Q86UF2 777 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 CTAGE3PQ8IX95 158 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 CSNK1A1LQ8N752 337 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 PPM1NQ8N819 430 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 MCOLN3Q8TDD5 553 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 APOBEC4Q8WW27 367 aaKnown RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 CCDC138Q96M89 665 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 PRAP1Q96NZ9 151 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 MACROD1Q9BQ69 325 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 DPH2Q9BQC3 489 aaPredicted RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 GPAMQ9HCL2 828 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 GEMIN8Q9NWZ8 242 aaKnown RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 ARL15Q9NXU5 204 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 NSMCE4AQ9NXX6 385 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 NINJ2Q9NZG7 142 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 IFT80Q9P2H3 777 aaPredicted RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 RUVBL1Q9Y265 456 aaKnown RBP9.42□□□□□ -0.9
PTPN2-208ENST00000589216 MAU2Q9Y6X3 613 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 SCN3AQ9NY46 2000 aa9.42□□□□□ -0.9
PTPN2-208ENST00000589216 PRRC2CQ9Y520 2896 aaKnown RBP9.41□□□□□ -0.9
PTPN2-208ENST00000589216 FEZF1A0PJY2 475 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 HYKKA2RU49 373 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 HMX2A2RU54 273 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 ALOX12BO75342 701 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 RFPL1O75677 317 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 CCNDBP1O95273 360 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 GSTA2P09210 222 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 CTAGE8P0CG41 777 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 AGXTP21549 392 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 ALAS2P22557 587 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 OTX2P32243 289 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 BCL6P41182 706 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 EFNA3P52797 238 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 AP1S2P56377 157 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 CSNK1G2P78368 415 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 ABATP80404 500 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 POU4F1Q01851 419 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 DLG1Q12959 904 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 BMPR2Q13873 1038 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 SLMAPQ14BN4 828 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 NAA25Q14CX7 972 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 ZKSCAN8Q15776 578 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-208ENST00000589216 FBXO48Q5FWF7 155 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 TCTE1Q5JU00 501 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 PRSS41Q7RTY9 318 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 PPP1R32Q7Z5V6 425 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 CTAGE4Q8IX94 777 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 TTC29Q8NA56 475 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-208ENST00000589216 OR56A3Q8NH54 315 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 C9orf43Q8TAL5 461 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-208ENST00000589216 CDKL2Q92772 493 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 FKBP10Q96AY3 582 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 PTERQ96BW5 349 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 FBXL8Q96CD0 374 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 MRRFQ96E11 262 aaKnown RBP9.41□□□□□ -0.9
PTPN2-208ENST00000589216 ABHD17AQ96GS6 310 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 PDLIM5Q96HC4 596 aaKnown RBP9.41□□□□□ -0.9
PTPN2-208ENST00000589216 CABS1Q96KC9 395 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 TSNARE1Q96NA8 513 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 SPSB2Q99619 263 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 CPNE1Q99829 537 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 TMEM79Q9BSE2 394 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 ADNPQ9H2P0 1102 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 CDC42EP4Q9H3Q1 356 aaKnown RBP9.41□□□□□ -0.9
PTPN2-208ENST00000589216 POPDC3Q9HBV1 291 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 ZNF71Q9NQZ8 489 aaPredicted RBP9.41□□□□□ -0.9
PTPN2-208ENST00000589216 TP53TG5Q9Y2B4 290 aa9.41□□□□□ -0.9
PTPN2-208ENST00000589216 PTRH2Q9Y3E5 179 aaKnown RBP9.41□□□□□ -0.9
PTPN2-208ENST00000589216 NCF1BA6NI72 391 aaPredicted RBP9.4□□□□□ -0.9
PTPN2-208ENST00000589216 NCF1CA8MVU1 366 aaPredicted RBP9.4□□□□□ -0.9
PTPN2-208ENST00000589216 FOXS1O43638 330 aa9.4□□□□□ -0.9
PTPN2-208ENST00000589216 SRPX2O60687 465 aaPredicted RBP9.4□□□□□ -0.9
PTPN2-208ENST00000589216 ONECUT2O95948 504 aa9.4□□□□□ -0.9
PTPN2-208ENST00000589216 RECKO95980 971 aa9.4□□□□□ -0.9
PTPN2-208ENST00000589216 ENO2P09104 434 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms