RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 FAM9CQ8IZT9 166 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 C2orf73Q8N5S3 287 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 DPP10Q8N608 796 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 OR5K2Q8NHB8 316 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 DNAJB14Q8TBM8 379 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SETD7Q8WTS6 366 aaKnown RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SLC13A3Q8WWT9 602 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SLC5A11Q8WWX8 675 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 DNAJC9Q8WXX5 260 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 WDR34Q96EX3 536 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 MSANTD3Q96H12 275 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 FCRL1Q96LA6 429 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 MRGPRX1Q96LB2 322 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 TSSK3Q96PN8 268 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 MTERF1Q99551 399 aaKnown RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 KCTD14Q9BQ13 255 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 EFCAB11Q9BUY7 163 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 TRIM8Q9BZR9 551 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 UBE2ZQ9H832 354 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 BRF2Q9HAW0 419 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 CD93Q9NPY3 652 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SPATA6Q9NWH7 488 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SPATA7Q9P0W8 599 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 VPS29Q9UBQ0 182 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 MMP17Q9ULZ9 603 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SUFUQ9UMX1 484 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 NDRG2Q9UN36 371 aaKnown RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 KCNK6Q9Y257 313 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 SLC17A4Q9Y2C5 497 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 PLEKHM1Q9Y4G2 1056 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 PCDHGA11Q9Y5H2 935 aa8.46□□□□□ -1.06
SMAD4-206ENST00000588860 CFAP20Q9Y6A4 193 aaKnown RBP8.46□□□□□ -1.06
SMAD4-206ENST00000588860 PIPSLA2A3N6 862 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 ZNF839A8K0R7 811 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 MAGEB17A8MXT2 336 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 SCAMP1O15126 338 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 GPR37O15354 613 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 LATO43561 262 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PI15O43692 258 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 SH3BGRLO75368 114 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 LRATO95237 230 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 KCNH1O95259 989 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 FUCA1P04066 466 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 GABRG2P18507 467 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 TACR1P25103 407 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 S100A3P33764 101 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 ID4P47928 161 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 GSK3BP49841 420 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 CLDN8P56748 225 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 CLDN2P57739 230 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 KIAA1024LP59773 190 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 RPS13P62277 151 aaKnown RBP8.45□□□□□ -1.06
SMAD4-206ENST00000588860 YBX1P67809 324 aaKnown RBP8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PHEXP78562 749 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 MEF2AQ02078 507 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-206ENST00000588860 TAP2Q03519 686 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 LIPEQ05469 1076 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 ACSM2AQ08AH3 577 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 LAPTM5Q13571 262 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 TRIP10Q15642 601 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 MAPKAPK3Q16644 382 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PGS1Q32NB8 556 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 SPATS1Q496A3 300 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PYCR3Q53H96 274 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 RABL3Q5HYI8 236 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 ICE2Q659A1 982 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 ACSM2BQ68CK6 577 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 CAPRIN2Q6IMN6 1127 aaKnown RBP8.45□□□□□ -1.06
SMAD4-206ENST00000588860 ADNP2Q6IQ32 1131 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 NXPE4Q6UWF7 544 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 LCTLQ6UWM7 567 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 RNF111Q6ZNA4 994 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PRR23BQ6ZRT6 265 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 IFNEQ86WN2 208 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 TRIM69Q86WT6 500 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 SYT12Q8IV01 421 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 HID1Q8IV36 788 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 KIAA2013Q8IYS2 634 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PQLC1Q8N2U9 271 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PGBD3Q8N328 593 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 RAB42Q8N4Z0 105 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 FLCNQ8NFG4 579 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 GPR156Q8NFN8 814 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 OR7G3Q8NG95 312 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 OR2T34Q8NGX1 318 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 HUS1BQ8NHY5 278 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 CDC26Q8NHZ8 85 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 HMGB4Q8WW32 186 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 ASB12Q8WXK4 309 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 C12orf66Q96MD2 445 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PPM1MQ96MI6 270 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 ZNF570Q96NI8 536 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 TMEM74Q96NL1 305 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 OR52E6Q96RD3 313 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 FERD3LQ96RJ6 166 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 INSM2Q96T92 566 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PRRX2Q99811 253 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 HAUS8Q9BT25 410 aa8.45□□□□□ -1.06
SMAD4-206ENST00000588860 PHF7Q9BWX1 381 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-206ENST00000588860 BTBD1Q9H0C5 482 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms