RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ZC3H7AQ8IWR0 971 aaKnown RBP20.6■□□□□ 0.89
CAPNS1-205ENST00000588780 ACTL9Q8TC94 416 aa20.6■□□□□ 0.89
CAPNS1-205ENST00000588780 RERGQ96A58 199 aaPredicted RBP20.6■□□□□ 0.89
CAPNS1-205ENST00000588780 SCMH1Q96GD3 660 aa20.6■□□□□ 0.89
CAPNS1-205ENST00000588780 FOXC2Q99958 501 aa20.6■□□□□ 0.89
CAPNS1-205ENST00000588780 FAM118BQ9BPY3 351 aa20.6■□□□□ 0.89
CAPNS1-205ENST00000588780 KCNJ16Q9NPI9 418 aa20.6■□□□□ 0.89
CAPNS1-205ENST00000588780 CCM2LQ9NUG4 571 aaPredicted RBP20.6■□□□□ 0.89
CAPNS1-205ENST00000588780 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.6■□□□□ 0.89
CAPNS1-205ENST00000588780 TMEM200CA6NKL6 621 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 IQCF5A8MTL0 148 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 ADAM10O14672 748 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 RBP3P10745 1247 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 FOXN2P32314 431 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 EMP3P54852 163 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 FOLH1Q04609 750 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 CCDC38Q502W7 563 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 PLAG1Q6DJT9 500 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 FBXO42Q6P3S6 717 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 LANCL3Q6ZV70 420 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 SIAH3Q8IW03 269 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 KATNAL2Q8IYT4 538 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 UCK2Q9BZX2 261 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 DRC3Q9H069 523 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 GOLPH3Q9H4A6 298 aa20.59■□□□□ 0.89
CAPNS1-205ENST00000588780 KRT87PA6NCN2 255 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 GABRR3A8MPY1 467 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 GOLGA6L22H0YM25 854 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 GPC4O75487 556 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 SP1P08047 785 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 ASTE1Q2TB18 679 aaPredicted RBP20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 TMEM211Q6ICI0 200 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 SLC25A25Q6KCM7 469 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 KRT222Q8N1A0 295 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 OR2A1Q8NGT9 310 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 LKAAEAR1Q8TD35 194 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 CCDC42Q96M95 316 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 GBP4Q96PP9 640 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 LRRC40Q9H9A6 602 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 NPDC1Q9NQX5 325 aaPredicted RBP20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 KCNN3Q9UGI6 736 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 KLK4Q9Y5K2 254 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 MRFAP1Q9Y605 127 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 ALG6Q9Y672 507 aa20.58■□□□□ 0.89
CAPNS1-205ENST00000588780 OR2A25A4D2G3 310 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 CHRNB4P30926 498 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 PTGS2P35354 604 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 PPARGP37231 505 aaPredicted RBP20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 AVPR1BP47901 424 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 MARCKSL1P49006 195 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 YBX1P67809 324 aaKnown RBP20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 CEBPEQ15744 281 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 CCSMST1Q4G0I0 132 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 GARNL3Q5VVW2 1013 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 CD163Q86VB7 1156 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 DMRTC2Q8IXT2 367 aaPredicted RBP20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 SLC5A8Q8N695 610 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 FOPNLQ96NB1 174 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 SCN2AQ99250 2005 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 CYTH2Q99418 400 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 CARD6Q9BX69 1037 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 VN1R1Q9GZP7 353 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 MRPS30Q9NP92 439 aaKnown RBP20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 LRFN1Q9P244 771 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 GNPTGQ9UJJ9 305 aa20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 RUVBL2Q9Y230 463 aaKnown RBP20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 MAP1AP78559 2803 aaPredicted RBP20.57■□□□□ 0.88
CAPNS1-205ENST00000588780 FBN3Q75N90 2809 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 USP27XA6NNY8 438 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 CDC40O60508 579 aaKnown RBP eCLIP20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 GOT2P00505 430 aaKnown RBP20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 IGFBP2P18065 325 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 PTGER1P34995 402 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 FOXD4Q12950 439 aaPredicted RBP20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 AFTPHQ6ULP2 937 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 CLEC17AQ6ZS10 378 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 TAOK1Q7L7X3 1001 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 OR8K1Q8NGG5 319 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 OR6P1Q8NGX9 317 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 HDAC10Q969S8 669 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 DNAJB12Q9NXW2 375 aaKnown RBP20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 TSR3Q9UJK0 312 aaKnown RBP20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 RNF6Q9Y252 685 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 ASB1Q9Y576 335 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 NFS1Q9Y697 457 aa20.56■□□□□ 0.88
CAPNS1-205ENST00000588780 TFECO14948 347 aaPredicted RBP20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 MAN1A2O60476 641 aa20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 C1orf105O95561 183 aa20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 MBD3O95983 291 aa20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 RPA3P35244 121 aaPredicted RBP20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 EFNA3P52797 238 aa20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 TAS2R50P59544 299 aa20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 ACTN3Q08043 901 aaPredicted RBP20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 IQCB1Q15051 598 aa20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 EXT1Q16394 746 aa20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 NDUFA9Q16795 377 aa20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 FASTKD1Q53R41 847 aaKnown RBP20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 PTRHD1Q6GMV3 140 aaKnown RBP20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 H3F3CQ6NXT2 135 aa20.55■□□□□ 0.88
CAPNS1-205ENST00000588780 CPSF7Q8N684 471 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms