RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 F7P08709 466 aaPredicted RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 ITGAMP11215 1152 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 PRF1P14222 555 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 PKMP14618 531 aaKnown RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 TNFRSF8P28908 595 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 ATP5DP30049 168 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 SOX11P35716 441 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 SLC26A3P40879 764 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 EMP3P54852 163 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 MAT1AQ00266 395 aaKnown RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 GBX1Q14549 363 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 KCNJ11Q14654 390 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 TYSND1Q2T9J0 566 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 RNF187Q5TA31 235 aaPredicted RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 ICE2Q659A1 982 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 CASC4Q6P4E1 433 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 GFRALQ6UXV0 394 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 PLD3Q8IV08 490 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 OR2A5Q96R48 311 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 TRIM56Q9BRZ2 755 aaKnown RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 TSGA10Q9BZW7 698 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 UNKQ9C0B0 810 aaKnown RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 MKKSQ9NPJ1 570 aaPredicted RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 FAM114A2Q9NRY5 505 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 C14orf105Q9NVL8 296 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 UTP6Q9NYH9 597 aaKnown RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 SOX13Q9UN79 622 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 ENTPD4Q9Y227 616 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 UNC79Q9P2D8 2635 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 NOTCH2Q04721 2471 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 TRGV8A0A0C4DH27 118 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 PCDH17O14917 1159 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 HAT1O14929 419 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 PHF2O75151 1096 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 CCNDBP1O95273 360 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 SLC16A8O95907 504 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 FGGP02679 453 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 ERGP11308 486 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 FDXRP22570 491 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 HSD17B2P37059 387 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 CUL1Q13616 776 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 NAA30Q147X3 362 aaPredicted RBP13.43□□□□□ -0.26
ERCC1-205ENST00000587888 ARHGAP19Q14CB8 494 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 PCOLCEQ15113 449 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 THEMIS2Q5TEJ8 643 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 MFSD4BQ5TF39 518 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 GARNL3Q5VVW2 1013 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 ZNF425Q6IV72 752 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 NEPROQ6NW34 567 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 DRICH1Q6PGQ1 229 aaPredicted RBP13.43□□□□□ -0.26
ERCC1-205ENST00000587888 CENPUQ71F23 418 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 GAS2L3Q86XJ1 694 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 REXO1L1PQ8IX06 675 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 SUN3Q8TAQ9 357 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 ZNF480Q8WV37 535 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 NR4A3Q92570 626 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 RELTQ969Z4 430 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 MVB12AQ96EY5 273 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 SLC30A3Q99726 388 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 TGIF2Q9GZN2 237 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 DRC3Q9H069 523 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 ZNF700Q9H0M5 742 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 RIC8BQ9NVN3 520 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 ZGRF1Q86YA3 2104 aa13.43□□□□□ -0.26
ERCC1-205ENST00000587888 CTAGE9A4FU28 777 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 ZNF839A8K0R7 811 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 A8MUI8 341 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 E7ENX8 843 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 H7BY64 318 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 SMAPO00193 183 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 TXNDC9O14530 226 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 P2RX6O15547 441 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 UNC5CO95185 931 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 RASAL1O95294 804 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 ICAM2P13598 275 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 EZRP15311 586 aaKnown RBP13.42□□□□□ -0.26
ERCC1-205ENST00000587888 PAMP19021 973 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 OGNP20774 298 aaKnown RBP13.42□□□□□ -0.26
ERCC1-205ENST00000587888 MST1P26927 711 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 AVPR1BP47901 424 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 VPS41P49754 854 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 CLCN7P51798 805 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 TDGF1P3P51864 188 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 ADARP55265 1226 aaKnown RBP13.42□□□□□ -0.26
ERCC1-205ENST00000587888 SNRPNP63162 240 aaKnown RBP13.42□□□□□ -0.26
ERCC1-205ENST00000587888 CDK16Q00536 496 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 TAP2Q03519 686 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 ZNF33BQ06732 778 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 ABHD17BQ5VST6 288 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 HIBCHQ6NVY1 386 aaPredicted RBP13.42□□□□□ -0.26
ERCC1-205ENST00000587888 TMEM205Q6UW68 189 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 TMEM207Q6UWW9 146 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 RIPOR1Q6ZS17 1223 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 CILP2Q8IUL8 1156 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 ZC3H7AQ8IWR0 971 aaKnown RBP13.42□□□□□ -0.26
ERCC1-205ENST00000587888 SHISA5Q8N114 240 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 OR9A4Q8NGU2 314 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 METTL21AQ8WXB1 218 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 PRAP1Q96NZ9 151 aa13.42□□□□□ -0.26
ERCC1-205ENST00000587888 MACROD1Q9BQ69 325 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms