RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FOXE1O00358 373 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 KDM1AO60341 852 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 PSMG1O95456 288 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 ETHE1O95571 254 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 EML2O95834 649 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 SDC1P18827 310 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 PSMB5P28074 263 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 DGKQP52824 942 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 CLDN8P56748 225 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 RPS13P62277 151 aaKnown RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 YBX1P67809 324 aaKnown RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 ACSM2AQ08AH3 577 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 ACSM2BQ68CK6 577 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 PRMT9Q6P2P2 845 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 TMIGD1Q6UXZ0 262 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 KRT78Q8N1N4 520 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 KRTCAP2Q8N6L1 136 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 NUDT8Q8WV74 236 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 TSSK3Q96PN8 268 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 GPATCH1Q9BRR8 931 aaKnown RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 CLMPQ9H6B4 373 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 TMEM181Q9P2C4 612 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 NKX1-2Q9UD57 310 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 DGKBQ9Y6T7 804 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 PRAMEF33A0A0G2JMD5 474 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 FXYD1O00168 92 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 TRIM38O00635 465 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 KRT36O76013 467 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 TNFP01375 233 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 IL6P05231 212 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 THEGLP0DJG4 465 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 TCN1P20061 433 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 TACR1P25103 407 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 PKLRP30613 574 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 MSX2P35548 267 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 SLC7A2P52569 658 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 FOXM1Q08050 763 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 ILF3Q12906 894 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 CAPRIN1Q14444 709 aaKnown RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 FAM174BQ3ZCQ3 159 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 FAM129CQ86XR2 697 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 SPEM1Q8N4L4 309 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 ENDOVQ8N8Q3 282 aaKnown RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 ZNF740Q8NDX6 193 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 OR2L8Q8NGY9 312 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 FCRL1Q96LA6 429 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 NMRK1Q9NWW6 199 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 RUVBL1Q9Y265 456 aaKnown RBP19.12■□□□□ 0.65
TRIM47-204ENST00000587339 L3MBTL1Q9Y468 752 aa19.12■□□□□ 0.65
TRIM47-204ENST00000587339 NDUFS2O75306 463 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 SH3BGRLO75368 114 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 NPPAP01160 153 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 XRCC1P18887 633 aaPredicted RBP19.11■□□□□ 0.65
TRIM47-204ENST00000587339 NDUFS1P28331 727 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 RCN1Q15293 331 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 SAMD4BQ5PRF9 694 aaKnown RBP19.11■□□□□ 0.65
TRIM47-204ENST00000587339 SLC2A7Q6PXP3 512 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 UBALD2Q8IYN6 164 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 PJA1Q8NG27 643 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 JADE3Q92613 823 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 EBPLQ9BY08 206 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 CHRDQ9H2X0 955 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 PELI2Q9HAT8 420 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 ICKQ9UPZ9 632 aa19.11■□□□□ 0.65
TRIM47-204ENST00000587339 SPTY2D1-AS1A0A0U1RR47 76 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 MYO1DO94832 1006 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 CXCR2P25025 360 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 PIK3CBP42338 1070 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 CCR8P51685 355 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 CLNS1AP54105 237 aaKnown RBP19.1■□□□□ 0.65
TRIM47-204ENST00000587339 PHEXP78562 749 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 FLOT2Q14254 428 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 SPIN4Q56A73 249 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 SPANXN4Q5MJ08 99 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 GJD3Q8N144 294 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 DPP10Q8N608 796 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 FAM156AQ8NDB6 213 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 ABHD11Q8NFV4 315 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 SLC13A3Q8WWT9 602 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 C11orf24Q96F05 449 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-204ENST00000587339 AIF1LQ9BQI0 150 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 KIR3DX1Q9H7L2 352 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 DMRT3Q9NQL9 472 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 AASDHPPTQ9NRN7 309 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 CUEDC1Q9NWM3 386 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-204ENST00000587339 TSC22D4Q9Y3Q8 395 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 PRORSD1PA6NEY8 169 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 PGRP06401 933 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 F3P13726 295 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 SLC6A2P23975 617 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 CCNIQ14094 377 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 RBBP5Q15291 538 aaKnown RBP19.1■□□□□ 0.65
TRIM47-204ENST00000587339 ICE2Q659A1 982 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 NRROSQ86YC3 692 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 SYT12Q8IV01 421 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 C1orf52Q8N6N3 182 aaKnown RBP19.1■□□□□ 0.65
TRIM47-204ENST00000587339 HIPK4Q8NE63 616 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 MAFAQ8NHW3 353 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-204ENST00000587339 CLDN23Q96B33 292 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 EGLN2Q96KS0 407 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms