RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ULBP3Q9BZM4 244 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 CD244Q9BZW8 370 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 FBXO8Q9NRD0 319 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 TMEM184CQ9NVA4 438 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 ZNF358Q9NW07 568 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 HELZ2Q9BYK8 2649 aaKnown RBP13.31□□□□□ -0.28
TRAF4-215ENST00000584944 A0A1W2PPV9 198 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 FOXO6A8MYZ6 492 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 TK2O00142 265 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 MAP2K7O14733 419 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 RRP8O43159 456 aaKnown RBP13.31□□□□□ -0.28
TRAF4-215ENST00000584944 OR2B3O76000 313 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 FOLR1P15328 257 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 CXCR2P25025 360 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 CRHR1P34998 444 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 GDF5P43026 501 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 CSRP3P50461 194 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 ITGA1P56199 1179 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 ASPHQ12797 758 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 HIST2H2ACQ16777 129 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-215ENST00000584944 FBXO48Q5FWF7 155 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 HIST2H2AA3Q6FI13 130 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 CDHR3Q6ZTQ4 885 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 TMPRSS11BQ86T26 416 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 TRABD2AQ86V40 505 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 SLC22A9Q8IVM8 553 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 MCATQ8IVS2 390 aaKnown RBP13.31□□□□□ -0.28
TRAF4-215ENST00000584944 KRT78Q8N1N4 520 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 PTGR2Q8N8N7 351 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-215ENST00000584944 PRR11Q96HE9 360 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-215ENST00000584944 PKNOX2Q96KN3 472 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 SLC46A1Q96NT5 459 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 GPR78Q96P69 363 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 ZFYVE21Q9BQ24 234 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 AIF1LQ9BQI0 150 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 PLCD4Q9BRC7 762 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 TMEM216Q9P0N5 145 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 SEMA5BQ9P283 1151 aa13.31□□□□□ -0.28
TRAF4-215ENST00000584944 PTBP2Q9UKA9 531 aaKnown RBP13.31□□□□□ -0.28
TRAF4-215ENST00000584944 KALRNO60229 2985 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 A0A0J9YVX5 310 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 E7EQ34 232 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 K7EPI3 171 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 PRICKLE3O43900 615 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-215ENST00000584944 PRAMEF10O60809 474 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 SPAG7O75391 227 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 NEFHP12036 1026 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 NPPBP16860 134 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 ATP5F1P24539 256 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-215ENST00000584944 EEF1DP29692 281 aaKnown RBP13.3□□□□□ -0.28
TRAF4-215ENST00000584944 GGT5P36269 586 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 ERVPABLB-1P60509 514 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 RPS15AP62244 130 aaKnown RBP13.3□□□□□ -0.28
TRAF4-215ENST00000584944 IRF8Q02556 426 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 SETDB1Q15047 1291 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 DEFB110Q30KQ9 67 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 C18orf21Q32NC0 220 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-215ENST00000584944 TBC1D25Q3MII6 688 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 XKR6Q5GH73 641 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 PAGE2BQ5JRK9 111 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 TCTE1Q5JU00 501 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 CFAP157Q5JU67 520 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 C16orf46Q6P387 395 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 LRRC56Q8IYG6 542 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-215ENST00000584944 TEX9Q8N6V9 391 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 TTC29Q8NA56 475 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-215ENST00000584944 FLVCR1-AS1Q8TAF5 88 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 RDH11Q8TC12 318 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 MZB1Q8WU39 189 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 ESAMQ96AP7 390 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 CLIP3Q96DZ5 547 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 PGM2Q96G03 612 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 ZNF578Q96N58 590 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-215ENST00000584944 NDC1Q9BTX1 674 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 CHRNA10Q9GZZ6 450 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 SLC6A20Q9NP91 592 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 KCNK9Q9NPC2 374 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 TXLNGQ9NUQ3 528 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 EURLQ9NYK6 297 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 GPRC5BQ9NZH0 403 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 AP1M2Q9Y6Q5 423 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 MGAQ8IWI9 3026 aa13.3□□□□□ -0.28
TRAF4-215ENST00000584944 STX16-NPEPL1H3BU86 382 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 TXNDC9O14530 226 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 STX16O14662 325 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 ATXN7O15265 892 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 NVLO15381 856 aaKnown RBP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 OR1F1O43749 312 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 SRPX2O60687 465 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 SCRG1O75711 98 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 SERPIND1P05546 499 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 HBQ1P09105 142 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 CCNYL3P0C7X3 344 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 CPA3P15088 417 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 H2AFXP16104 143 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 CD82P27701 267 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 SLC5A2P31639 672 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 SLC6A12P48065 614 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 KCNC1P48547 511 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 AGTR2P50052 363 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms