RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PCM1Q15154 2024 aa9.95□□□□□ -0.82
RFFL-212ENST00000584655 TNRC18O15417 2968 aaPredicted RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 A0A1B0GVG6 124 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 EFEMP2O95967 443 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 HNRNPA1P09651 372 aaKnown RBP eCLIP9.94□□□□□ -0.82
RFFL-212ENST00000584655 POLR2CP19387 275 aaPredicted RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 IL10P22301 178 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 PSMA4P25789 261 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 FEN1P39748 380 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 OCA2Q04671 838 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 TMED1Q13445 227 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 TBCCQ15814 346 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 NNATQ16517 81 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 DUSP6Q16828 381 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 PIGGQ5H8A4 983 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 SAMD4BQ5PRF9 694 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 METTL21CQ5VZV1 264 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 VANGL1Q8TAA9 524 aaPredicted RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 ASB11Q8WXH4 323 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 L3HYPDHQ96EM0 354 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 SEZ6LQ9BYH1 1024 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 ROGDIQ9GZN7 287 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 VCX3BQ9H321 246 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 RDH14Q9HBH5 336 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 RASSF1Q9NS23 344 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 CHRM5P08912 532 aaPredicted RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 IMPA1P29218 277 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 PRIM2P49643 509 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 FOXL2P58012 376 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 ADGRE1Q14246 886 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 SLC9A5Q14940 896 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 CDKN3Q16667 212 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 MPP7Q5T2T1 576 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 TLDC1Q6P9B6 456 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 DSG4Q86SJ6 1040 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 ADGRG6Q86SQ4 1221 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.94□□□□□ -0.82
RFFL-212ENST00000584655 FAM47BQ8NA70 645 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 DTD2Q96FN9 168 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 LMLNQ96KR4 655 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 CCDC28BQ9BUN5 200 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 FGF22Q9HCT0 170 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 ZDHHC7Q9NXF8 308 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 CD207Q9UJ71 328 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 GPR45Q9Y5Y3 372 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 A0A1W2PS29 197 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 LSM1O15116 133 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 HS6ST1O60243 411 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 PFDN1O60925 122 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 RNGTTO60942 597 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 EML2O95834 649 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 CELA2BP08218 269 aaPredicted RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 LINGO3P0C6S8 592 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 LSM3P62310 102 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 MRPS35P82673 323 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 LRP8Q14114 963 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 GANABQ14697 944 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 NEDD8Q15843 81 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.94□□□□□ -0.82
RFFL-212ENST00000584655 ZNF852Q6ZMS4 543 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 RPF2Q9H7B2 306 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 PTBP2Q9UKA9 531 aaKnown RBP9.94□□□□□ -0.82
RFFL-212ENST00000584655 BAG5Q9UL15 447 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 RAB23Q9ULC3 237 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 SNX6Q9UNH7 406 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 OARD1Q9Y530 152 aa9.94□□□□□ -0.82
RFFL-212ENST00000584655 FPGTO14772 594 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 HYAL3O43820 417 aaPredicted RBP9.93□□□□□ -0.82
RFFL-212ENST00000584655 MYO1DO94832 1006 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 BLMHQ13867 455 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 FGL2Q14314 439 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 AMZ1Q400G9 498 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 MFSD4BQ5TF39 518 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 C1orf53Q5VUE5 145 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 NUDT18Q6ZVK8 323 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 CACTIN-AS1Q8N1I8 211 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 TRIML2Q8N7C3 387 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 AMER3Q8N944 861 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 OR7G3Q8NG95 312 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 DCUN1D5Q9BTE7 237 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 FSCN3Q9NQT6 498 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 LEF1Q9UJU2 399 aaPredicted RBP9.93□□□□□ -0.82
RFFL-212ENST00000584655 HCN2Q9UL51 889 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 HEMK1Q9Y5R4 338 aaPredicted RBP9.93□□□□□ -0.82
RFFL-212ENST00000584655 ASPDHA6ND91 283 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 CYP7B1O75881 506 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 SERPINA1P01009 418 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 SDC1P18827 310 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 GNAZP19086 355 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 ALDH4A1P30038 563 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 PRRT3Q5FWE3 981 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 HENMT1Q5T8I9 393 aaKnown RBP9.93□□□□□ -0.82
RFFL-212ENST00000584655 NOXRED1Q6NXP6 359 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 CCDC81Q6ZN84 652 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 FAM46DQ8NEK8 389 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 PRR14Q9BWN1 585 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 CHID1Q9BWS9 393 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 PCDHB14Q9Y5E9 798 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 SOCS2O14508 198 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 ZNF189O75820 626 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms