RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 WDR34Q96EX3 536 aa11.55□□□□□ -0.56
GGA3-217ENST00000583667 PRR11Q96HE9 360 aaPredicted RBP11.55□□□□□ -0.56
GGA3-217ENST00000583667 PKP4Q99569 1192 aa11.55□□□□□ -0.56
GGA3-217ENST00000583667 SGPP1Q9BX95 441 aa11.55□□□□□ -0.56
GGA3-217ENST00000583667 AKTIPQ9H8T0 292 aa11.55□□□□□ -0.56
GGA3-217ENST00000583667 TM9SF3Q9HD45 589 aa11.55□□□□□ -0.56
GGA3-217ENST00000583667 GPR27Q9NS67 375 aa11.55□□□□□ -0.56
GGA3-217ENST00000583667 STOX2Q9P2F5 926 aaPredicted RBP11.55□□□□□ -0.56
GGA3-217ENST00000583667 C2CD3Q4AC94 2353 aa11.55□□□□□ -0.56
GGA3-217ENST00000583667 ITPR3Q14573 2671 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 A0A1B0GTQ1 180 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 POM121BA6NF01 834 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 PIP5K1BO14986 540 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 UBDO15205 165 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 DFNA5O60443 496 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 CRCPO75575 148 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 DXOO77932 396 aaKnown RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 SLC16A8O95907 504 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 IGHV4-34P06331 123 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 CAPN1P07384 714 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 THRAP10827 490 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 LBPP18428 481 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 NCF2P19878 526 aaPredicted RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 POU3F2P20265 443 aaPredicted RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 CCND1P24385 295 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 HTR1BP28222 390 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 IMPA1P29218 277 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 INSM1Q01101 510 aaPredicted RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 GRB7Q14451 532 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 GSTA3Q16772 222 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 FBXO48Q5FWF7 155 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 PRAMEF14Q5SWL7 426 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 C10orf62Q5T681 223 aaPredicted RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 CRTC3Q6UUV7 619 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 ABRAXAS1Q6UWZ7 409 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 FAM124AQ86V42 546 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 GALNT13Q8IUC8 556 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 DCUN1D3Q8IWE4 304 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 LRRC56Q8IYG6 542 aaPredicted RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 TBC1D21Q8IYX1 336 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 RP9Q8TA86 221 aaKnown RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 TFGQ92734 400 aaPredicted RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 USP7Q93009 1102 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 ATP6V1E2Q96A05 226 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 KLHL29Q96CT2 875 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 LIN37Q96GY3 246 aaPredicted RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 C3orf30Q96M34 536 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 WDR92Q96MX6 357 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 BTBD10Q9BSF8 475 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 RIC8BQ9NVN3 520 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 ARMCX1Q9P291 453 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 ZNHIT2Q9UHR6 403 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 TSR3Q9UJK0 312 aaKnown RBP11.54□□□□□ -0.56
GGA3-217ENST00000583667 CCL27Q9Y4X3 112 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 CAPN7Q9Y6W3 813 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 TMEM131Q92545 1883 aa11.54□□□□□ -0.56
GGA3-217ENST00000583667 KCNE1BA0A087WTH5 132 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 BLACEA4D250 179 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 ZNF839A8K0R7 811 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 E9PBE3 544 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 SLC28A1O00337 649 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 IFRD1O00458 451 aaPredicted RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 KLHL41O60662 606 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 SKAP2O75563 359 aaPredicted RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 CBX6O95503 412 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 IDSP22304 550 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 PRPH2P23942 346 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 PBLDP30039 288 aaPredicted RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 MAT2AP31153 395 aaKnown RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 HNF4AP41235 474 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 RABIFP47224 123 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 PNLIPRP1P54315 467 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 ILKQ13418 452 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 PTK2BQ14289 1009 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 SQLEQ14534 574 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 CYP2A13Q16696 494 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 NXNQ6DKJ4 435 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 DOK6Q6PKX4 331 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 MBOAT1Q6ZNC8 495 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 GCNT7Q6ZNI0 430 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 Q6ZSR9 355 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 THOC6Q86W42 341 aaKnown RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 DCP2Q8IU60 420 aaKnown RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 EID2Q8N6I1 236 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 CDYL2Q8N8U2 506 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 OR5K2Q8NHB8 316 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 HMGCLL1Q8TB92 370 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 TSPEARQ8WU66 669 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 ZNF480Q8WV37 535 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 SNX19Q92543 992 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 METTL2AQ96IZ6 378 aaKnown RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 KCNA7Q96RP8 456 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 MIPEPQ99797 713 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 MMADHCQ9H3L0 296 aaPredicted RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 EHD1Q9H4M9 534 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 EBF2Q9HAK2 575 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 INTS7Q9NVH2 962 aaKnown RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 TRNAU1APQ9NX07 287 aaKnown RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 TAS2R1Q9NYW7 299 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 SPATA7Q9P0W8 599 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms