RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 FAM214AQ32MH5 1076 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 NKAIN1Q4KMZ8 207 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 CRTC2Q53ET0 693 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 YOD1Q5VVQ6 348 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 LCTLQ6UWM7 567 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 CMC1Q7Z7K0 106 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 SYVN1Q86TM6 617 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 PLD3Q8IV08 490 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 METTL27Q8N6F8 245 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 CSNK1A1LQ8N752 337 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 OR56A3Q8NH54 315 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 CABS1Q96KC9 395 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 ZNF285Q96NJ3 590 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 HAUS8Q9BT25 410 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 SGPP1Q9BX95 441 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 DERL2Q9GZP9 239 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 TMEM184CQ9NVA4 438 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 SH2B3Q9UQQ2 575 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 POLHQ9Y253 713 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 PADI2Q9Y2J8 665 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 OARD1Q9Y530 152 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 IGSF10Q6WRI0 2623 aa12.05□□□□□ -0.48
SMARCE1-218ENST00000582955 FITM1A5D6W6 292 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 NCF1BA6NI72 391 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 NCF1CA8MVU1 366 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 WISP3O95389 354 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 CAPN1P07384 714 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 FAM87AP0C7U9 286 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 CDH1P12830 882 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 NCF1P14598 390 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 HRH2P25021 359 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 CRABP2P29373 138 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 CCR10P46092 362 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 GCGRP47871 477 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 ATP6V0D1P61421 351 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 IL10RAQ13651 578 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 BMPR2Q13873 1038 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 CSHL1Q14406 222 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 LINC00303Q3SY05 128 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 MROH9Q5TGP6 573 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 FAM69BQ5VUD6 431 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 TBC1D1Q86TI0 1168 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 LSM14AQ8ND56 463 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 LRRN4CLQ8ND94 238 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 UHMK1Q8TAS1 419 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 WBP1Q96G27 269 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 DHRS4Q9BTZ2 278 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 FAM117AQ9C073 453 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 ACSS3Q9H6R3 686 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 TCFL5Q9UL49 500 aa12.04□□□□□ -0.48
SMARCE1-218ENST00000582955 TK2O00142 265 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 RECKO95980 971 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 STATHP02808 62 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 PRB1P04280 392 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 INHBAP08476 426 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 PIM1P11309 404 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 CD1DP15813 335 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 NPPBP16860 134 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 GRK3P35626 688 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 GMPRP36959 345 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 HNMTP50135 292 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 RPS15AP62244 130 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 CSNK1G2P78368 415 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 CDKL1Q00532 357 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 RELAQ04206 551 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 TGFBIQ15582 683 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 UGT8Q16880 541 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 ZXDCQ2QGD7 858 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 MUM1Q2TAK8 710 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 HKDC1Q2TB90 917 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 PRTGQ2VWP7 1150 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 TEX35Q5T0J7 233 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 GPSM1Q86YR5 675 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 APOBEC4Q8WW27 367 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 EXT2Q93063 718 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 TSNARE1Q96NA8 513 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 OR2A5Q96R48 311 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 OR4K3Q96R72 315 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 SYNPO2LQ9H987 977 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 RNF112Q9ULX5 631 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 RUVBL1Q9Y265 456 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 MAN2B2Q9Y2E5 1009 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 PTRH2Q9Y3E5 179 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 DYRK1BQ9Y463 629 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 IKBKGQ9Y6K9 419 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 MAU2Q9Y6X3 613 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 CACNA1GO43497 2377 aa12.03□□□□□ -0.48
SMARCE1-218ENST00000582955 HEATR5BQ9P2D3 2071 aa12.02□□□□□ -0.48
SMARCE1-218ENST00000582955 ATMQ13315 3056 aa12.02□□□□□ -0.48
SMARCE1-218ENST00000582955 A0A087WUV0 522 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-218ENST00000582955 FEZF1A0PJY2 475 aa12.02□□□□□ -0.49
SMARCE1-218ENST00000582955 POC1B-GALNT4F8VUJ3 575 aa12.02□□□□□ -0.49
SMARCE1-218ENST00000582955 TXNDC9O14530 226 aa12.02□□□□□ -0.49
SMARCE1-218ENST00000582955 WDR47O94967 919 aa12.02□□□□□ -0.49
SMARCE1-218ENST00000582955 MED26O95402 600 aa12.02□□□□□ -0.49
SMARCE1-218ENST00000582955 S100BP04271 92 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-218ENST00000582955 CD63P08962 238 aa12.02□□□□□ -0.49
SMARCE1-218ENST00000582955 SLC35E2BP0CK96 405 aa12.02□□□□□ -0.49
SMARCE1-218ENST00000582955 ITGAXP20702 1163 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms