RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 AKAP14Q86UN6 197 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 CALHM3Q86XJ0 350 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 MSRB3Q8IXL7 192 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 DCBLD1Q8N8Z6 715 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 OR4F6Q8NGB9 312 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 IPCEF1Q8WWN9 437 aaPredicted RBP13.23□□□□□ -0.29
GGA3-214ENST00000582717 LGALS12Q96DT0 336 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 PDLIM5Q96HC4 596 aaKnown RBP13.23□□□□□ -0.29
GGA3-214ENST00000582717 PYURFQ96I23 114 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 C19orf43Q9BQ61 176 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 DPY30Q9C005 99 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 MMP27Q9H306 513 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 SUV39H2Q9H5I1 410 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 IKZF5Q9H5V7 419 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 EXD2Q9NVH0 621 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 ASIC5Q9NY37 505 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 SLC25A37Q9NYZ2 338 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 KLHL3Q9UH77 587 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 CRLS1Q9UJA2 301 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 SLC25A13Q9UJS0 675 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 IFT52Q9Y366 437 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 CCL27Q9Y4X3 112 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 PCDHB14Q9Y5E9 798 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 PRRC2BQ5JSZ5 2229 aaKnown RBP13.23□□□□□ -0.29
GGA3-214ENST00000582717 ALPK3Q96L96 1907 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 TRBV5-3A0A0A0MS03 114 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 SLC28A1O00337 649 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 OR7A17O14581 309 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 AREL1O15033 823 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 NUAK1O60285 661 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 MT-ND2P03891 347 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 EPCAMP16422 314 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 LHCGRP22888 699 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 ALDH4A1P30038 563 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 FMO3P31513 532 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 MASP1P48740 699 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 ARHGDIAP52565 204 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 NCS1P62166 190 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 LSM3P62310 102 aaKnown RBP13.23□□□□□ -0.29
GGA3-214ENST00000582717 RPL38P63173 70 aaKnown RBP13.23□□□□□ -0.29
GGA3-214ENST00000582717 PLIN5Q00G26 463 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 GTF2H2Q13888 395 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 LRRC73Q5JTD7 316 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 CPZQ66K79 652 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 GTF2H2CQ6P1K8 395 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 Q6ZVU0 165 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 PAGE2Q7Z2X7 111 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 ADAMTSL2Q86TH1 951 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 PLPP6Q8IY26 295 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 CHPFQ8IZ52 775 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 CBARPQ8N350 705 aaPredicted RBP13.23□□□□□ -0.29
GGA3-214ENST00000582717 CHST14Q8NCH0 376 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 MCFD2Q8NI22 146 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 FCGR1BQ92637 280 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 IRF7Q92985 503 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 TBCDQ9BTW9 1192 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 ACOT13Q9NPJ3 140 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 C1orf109Q9NX04 203 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 A3GALT2U3KPV4 340 aa13.23□□□□□ -0.29
GGA3-214ENST00000582717 CXorf51AA0A1B0GTR3 108 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 TLL1O43897 1013 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 MAN1A2O60476 641 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ERN1O75460 977 aaKnown RBP13.22□□□□□ -0.29
GGA3-214ENST00000582717 SLC25A14O95258 325 aaPredicted RBP13.22□□□□□ -0.29
GGA3-214ENST00000582717 SERPINA1P01009 418 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 PGRP06401 933 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 TYRP14679 529 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 DDX6P26196 483 aaKnown RBP eCLIP13.22□□□□□ -0.29
GGA3-214ENST00000582717 UGT2B10P36537 528 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 TRAF3Q13114 568 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ABRAXAS2Q15018 415 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 MAPK11Q15759 364 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ZNF77Q15935 545 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 CARD16Q5EG05 197 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 TPRG1Q6ZUI0 275 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 DET1Q7L5Y6 550 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 NXPE1Q8N323 547 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ZHX1-C8orf76Q96EF9 292 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 SCRN2Q96FV2 425 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ZSWIM3Q96MP5 696 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 CLMPQ9H6B4 373 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 GMPPBQ9Y5P6 360 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 CSNK2BP67870 215 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 CAMK1Q14012 370 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ARHGAP15Q53QZ3 475 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 LY6G5CQ5SRR4 150 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ATAD3BQ5T9A4 648 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 GCNT7Q6ZNI0 430 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 MILR1Q7Z6M3 343 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ADIPOR2Q86V24 386 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 LYSMD2Q8IV50 215 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ZDHHC21Q8IVQ6 265 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 ZNF540Q8NDQ6 660 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 PSMA8Q8TAA3 256 aa13.22□□□□□ -0.29
GGA3-214ENST00000582717 FAM120BQ96EK7 910 aaKnown RBP13.22□□□□□ -0.29
GGA3-214ENST00000582717 MCCC1Q96RQ3 725 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms