RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CCSMST1Q4G0I0 132 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 FAAH2Q6GMR7 532 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 LRRC8BQ6P9F7 803 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 RPTNQ6XPR3 784 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 GSTA5Q7RTV2 222 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 SLC13A5Q86YT5 568 aaPredicted RBP17.01■□□□□ 0.31
MKS1-209ENST00000580127 ZNF808Q8N4W9 903 aaPredicted RBP17.01■□□□□ 0.31
MKS1-209ENST00000580127 UNKQ9C0B0 810 aaKnown RBP17.01■□□□□ 0.31
MKS1-209ENST00000580127 DRC3Q9H069 523 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 ZNF700Q9H0M5 742 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 TREX1Q9NSU2 369 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 MKL2Q9ULH7 1088 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 MED26O95402 600 aa17■□□□□ 0.31
MKS1-209ENST00000580127 PAMP19021 973 aa17■□□□□ 0.31
MKS1-209ENST00000580127 ADARP55265 1226 aaKnown RBP17■□□□□ 0.31
MKS1-209ENST00000580127 CDK16Q00536 496 aa17■□□□□ 0.31
MKS1-209ENST00000580127 EEF1A2Q05639 463 aaKnown RBP17■□□□□ 0.31
MKS1-209ENST00000580127 CCNG2Q16589 344 aa17■□□□□ 0.31
MKS1-209ENST00000580127 ZXDCQ2QGD7 858 aaPredicted RBP17■□□□□ 0.31
MKS1-209ENST00000580127 TTLL9Q3SXZ7 439 aa17■□□□□ 0.31
MKS1-209ENST00000580127 XKRXQ6PP77 449 aa17■□□□□ 0.31
MKS1-209ENST00000580127 MRGPRGQ86SM5 289 aa17■□□□□ 0.31
MKS1-209ENST00000580127 DTWD1Q8N5C7 304 aa17■□□□□ 0.31
MKS1-209ENST00000580127 C10orf90Q96M02 699 aa17■□□□□ 0.31
MKS1-209ENST00000580127 TAAR6Q96RI8 345 aa17■□□□□ 0.31
MKS1-209ENST00000580127 STOX2Q9P2F5 926 aaPredicted RBP17■□□□□ 0.31
MKS1-209ENST00000580127 C19orf25Q9UFG5 118 aaPredicted RBP17■□□□□ 0.31
MKS1-209ENST00000580127 RUVBL1Q9Y265 456 aaKnown RBP17■□□□□ 0.31
MKS1-209ENST00000580127 HEATR5BQ9P2D3 2071 aa17■□□□□ 0.31
MKS1-209ENST00000580127 LOC102723996A0A087X1L8 192 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 OR5H15A6NDH6 313 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 PRAMEF2O60811 474 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 WDPCPO95876 746 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 CYC1P08574 325 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 C8orf89P0DMQ9 161 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 ESRRAP11474 423 aaPredicted RBP16.99■□□□□ 0.31
MKS1-209ENST00000580127 ETS1P14921 441 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 HRH2P25021 359 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 NMBRP28336 390 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 RPL22P35268 128 aaKnown RBP16.99■□□□□ 0.31
MKS1-209ENST00000580127 PTGER4P35408 488 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 SMSP52788 366 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 PNLIPRP1P54315 467 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 BASP1P80723 227 aaKnown RBP16.99■□□□□ 0.31
MKS1-209ENST00000580127 FASTKQ14296 549 aaKnown RBP16.99■□□□□ 0.31
MKS1-209ENST00000580127 MEI1Q5TIA1 1274 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 ARMC3Q5W041 872 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 ICE2Q659A1 982 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 SUSD1Q6UWL2 747 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 ADCK2Q7Z695 626 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 PAQR7Q86WK9 346 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 MAIP1Q8WWC4 291 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 BIRC8Q96P09 236 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 KIFC1Q9BW19 673 aa16.99■□□□□ 0.31
MKS1-209ENST00000580127 RUVBL2Q9Y230 463 aaKnown RBP16.99■□□□□ 0.31
MKS1-209ENST00000580127 MYO1CO00159 1063 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 PSIP1O75475 530 aaKnown RBP16.98■□□□□ 0.31
MKS1-209ENST00000580127 COX6B1P14854 86 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 TDGF1P3P51864 188 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 CRADDP78560 199 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 ZNF33BQ06732 778 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 KLHL38Q2WGJ6 581 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 THEMIS2Q5TEJ8 643 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 HIBCHQ6NVY1 386 aaPredicted RBP16.98■□□□□ 0.31
MKS1-209ENST00000580127 TMEM205Q6UW68 189 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 NEK10Q6ZWH5 1172 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 GDF7Q7Z4P5 450 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 ZNF354BQ96LW1 612 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 OR2A5Q96R48 311 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 CCDC68Q9H2F9 335 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 TAC3Q9UHF0 121 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 TSR3Q9UJK0 312 aaKnown RBP16.98■□□□□ 0.31
MKS1-209ENST00000580127 ZKSCAN5Q9Y2L8 839 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 CRYL1Q9Y2S2 319 aa16.98■□□□□ 0.31
MKS1-209ENST00000580127 TEP1Q99973 2627 aaKnown RBP16.97■□□□□ 0.31
MKS1-209ENST00000580127 A0A0A6YYC8 382 aaPredicted RBP16.97■□□□□ 0.31
MKS1-209ENST00000580127 A8MUI8 341 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 I3L1I5 382 aaPredicted RBP16.97■□□□□ 0.31
MKS1-209ENST00000580127 TTI1O43156 1089 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 ZBTB14O43829 449 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 ERGP11308 486 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 PRF1P14222 555 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 HTR1EP28566 365 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 CA7P43166 264 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 RPS6KA1Q15418 735 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 HKDC1Q2TB90 917 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 KRTCAP3Q53RY4 240 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 CTSL3PQ5NE16 218 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 MFSD4BQ5TF39 518 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 DRICH1Q6PGQ1 229 aaPredicted RBP16.97■□□□□ 0.31
MKS1-209ENST00000580127 BNC2Q6ZN30 1099 aaPredicted RBP16.97■□□□□ 0.31
MKS1-209ENST00000580127 AMER3Q8N944 861 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 ITLN2Q8WWU7 325 aaPredicted RBP16.97■□□□□ 0.31
MKS1-209ENST00000580127 LPGAT1Q92604 370 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 PKP4Q99569 1192 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 MESP1Q9BRJ9 268 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 HOMER3Q9NSC5 361 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 PCYOX1Q9UHG3 505 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 PCDHGB6Q9Y5F9 930 aa16.97■□□□□ 0.31
MKS1-209ENST00000580127 SCN2AQ99250 2005 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms