RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 PELI2Q9HAT8 420 aa15.28■□□□□ 0.04
CSNK1D-212ENST00000580061 SNX7Q9UNH6 387 aa15.28■□□□□ 0.04
CSNK1D-212ENST00000580061 A0A1B0GTL3 188 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 OR2A25A4D2G3 310 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 A8MU76 341 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 UBFD1O14562 309 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 NRP2O60462 931 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 UGDHO60701 494 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 PRAMEF10O60809 474 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 ZBTB11O95625 1053 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 OTCP00480 354 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 EBLN1P0CF75 366 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 GRK2P25098 689 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 VARSP26640 1264 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 ARRB2P32121 409 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 IRF8Q02556 426 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 GALNT1Q10472 559 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 TRA2AQ13595 282 aaKnown RBP eCLIP15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 DOC2AQ14183 400 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 ZIC1Q15915 447 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 XKR6Q5GH73 641 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 ATG14Q6ZNE5 492 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 ADCK2Q7Z695 626 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 B3GNT8Q7Z7M8 397 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 FAM129CQ86XR2 697 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 KMT5CQ86Y97 462 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 LSMEM2Q8N112 164 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 OR4F6Q8NGB9 312 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 AGAP11Q8TF27 550 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 PTCD3Q96EY7 689 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 TMEM74Q96NL1 305 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 CDK15Q96Q40 435 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 ZNF382Q96SR6 550 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 CHRNA10Q9GZZ6 450 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 MANSC1Q9H8J5 431 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 ACTR8Q9H981 624 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 ZNF225Q9UK10 706 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 STK38LQ9Y2H1 464 aa15.27■□□□□ 0.04
CSNK1D-212ENST00000580061 PTPRBP23467 1997 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 TMEM114B3SHH9 223 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 CLDN9O95484 217 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 CHRNGP07510 517 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 CD22P20273 847 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 CCKBRP32239 447 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 SEPHS1P49903 392 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 INHBCP55103 352 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 PKNOX1P55347 436 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 CLDN6P56747 220 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 ERVPABLB-1P60509 514 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 ABCE1P61221 599 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 SH3BP2P78314 561 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 REEP5Q00765 189 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 RELAQ04206 551 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 BST1Q10588 318 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 STX3Q13277 289 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 SLBPQ14493 270 aaKnown RBP eCLIP15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 ARL13AQ5H913 290 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 PHF19Q5T6S3 580 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 LIPJQ5W064 366 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 MILR1Q7Z6M3 343 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 SYVN1Q86TM6 617 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 DCBLD1Q8N8Z6 715 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 L3MBTL4Q8NA19 623 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 RCBTB1Q8NDN9 531 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 CKAP2Q8WWK9 683 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 ZNF75CPQ92670 426 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 TCTN2Q96GX1 697 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 SLC41A2Q96JW4 573 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 AIF1LQ9BQI0 150 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 EFCAB11Q9BUY7 163 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 SPNS1Q9H2V7 528 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 FAM60AQ9NP50 221 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 GEMIN8Q9NWZ8 242 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 DLL3Q9NYJ7 618 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 BTRCQ9Y297 605 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 RNF11Q9Y3C5 154 aa15.26■□□□□ 0.03
CSNK1D-212ENST00000580061 KLF11O14901 512 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 HAT1O14929 419 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 ITM2AO43736 263 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 CTSVO60911 334 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 OR4F21O95013 312 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 ESRRBO95718 433 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 MT-CO3P00414 261 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 EZRP15311 586 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 NELFEP18615 380 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 CXCR2P25025 360 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 GRK3P35626 688 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 ARL1P40616 181 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 HNF4AP41235 474 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 SLC1A6P48664 564 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 HSD11B2P80365 405 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 MEF2AQ02078 507 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 LAPTM5Q13571 262 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 GGTA1PQ4G0N0 100 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 PAGE2BQ5JRK9 111 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 HES3Q5TGS1 186 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 ATG16L1Q676U5 607 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 GRHL2Q6ISB3 625 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 LETMD1Q6P1Q0 360 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 FBXO42Q6P3S6 717 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms