RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SDC1P18827 310 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 MSX2P35548 267 aaPredicted RBP10.74□□□□□ -0.69
SKA2-204ENST00000578519 GRK3P35626 688 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 ERFP50548 548 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 CCR8P51685 355 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 CLCNKAP51800 687 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 DGKQP52824 942 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 ABATP80404 500 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 CYP4F3Q08477 520 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 PTGR1Q14914 329 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 DUOXA1Q1HG43 343 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 FAM98BQ52LJ0 330 aaKnown RBP10.74□□□□□ -0.69
SKA2-204ENST00000578519 RUNDC3AQ59EK9 446 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 SPANXN4Q5MJ08 99 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 LRIF1Q5T3J3 769 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 GLYATQ6IB77 296 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 CAPRIN2Q6IMN6 1127 aaKnown RBP10.74□□□□□ -0.69
SKA2-204ENST00000578519 ERICH5Q6P6B1 374 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 TLDC1Q6P9B6 456 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 SUSD1Q6UWL2 747 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 KIAA1324Q6UXG2 1013 aaKnown RBP10.74□□□□□ -0.69
SKA2-204ENST00000578519 TMIGD1Q6UXZ0 262 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 DLEU7Q6UYE1 221 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 CYP2R1Q6VVX0 501 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 CHST15Q7LFX5 561 aaPredicted RBP10.74□□□□□ -0.69
SKA2-204ENST00000578519 IFNEQ86WN2 208 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 TRIM69Q86WT6 500 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 PACRGLQ8N7B6 248 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 FAM156AQ8NDB6 213 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 TRPV3Q8NET8 790 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 OR2T12Q8NG77 320 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 OR52E4Q8NGH9 312 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 HUS1BQ8NHY5 278 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 FAM3CQ92520 227 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 EME1Q96AY2 570 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 MTERF3Q96E29 417 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 FAM120BQ96EK7 910 aaKnown RBP10.74□□□□□ -0.69
SKA2-204ENST00000578519 APIPQ96GX9 242 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 C12orf66Q96MD2 445 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 PPM1MQ96MI6 270 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 TSSK3Q96PN8 268 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 OR4K3Q96R72 315 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 MTERF1Q99551 399 aaKnown RBP10.74□□□□□ -0.69
SKA2-204ENST00000578519 SLC39A3Q9BRY0 314 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 SPATA9Q9BWV2 254 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 OSGEPL1Q9H4B0 414 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 ACTL8Q9H568 366 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 MBNL1Q9NR56 388 aaKnown RBP10.74□□□□□ -0.69
SKA2-204ENST00000578519 RAB26Q9ULW5 256 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 INVSQ9Y283 1065 aa10.74□□□□□ -0.69
SKA2-204ENST00000578519 DENND4AQ7Z401 1863 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 A0A1W2PPC1 479 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 GNG14A0A1W2PPG7 69 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 A0A1W2PQF6 199 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 ELOVL7A1L3X0 281 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 PIPSLA2A3N6 862 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 ASPDHA6ND91 283 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 PDZK1P1A8MUH7 402 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 C9JVG2 144 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 ARPC2O15144 300 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 EPN2O95208 641 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 ACP5P13686 325 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 UQCRBP14927 111 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 HNRNPA2B1P22626 353 aaKnown RBP10.73□□□□□ -0.69
SKA2-204ENST00000578519 OXTRP30559 389 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 TIA1P31483 386 aaKnown RBP eCLIP10.73□□□□□ -0.695e-7■■□□□ 11.7
SKA2-204ENST00000578519 ATXN3P54252 364 aaPredicted RBP10.73□□□□□ -0.69
SKA2-204ENST00000578519 POLE2P56282 527 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 CHRNB3Q05901 458 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 ABHD18Q0P651 414 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 MTAPQ13126 283 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 RBBP5Q15291 538 aaKnown RBP10.73□□□□□ -0.69
SKA2-204ENST00000578519 CYP51A1Q16850 503 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 ZXDCQ2QGD7 858 aaPredicted RBP10.73□□□□□ -0.69
SKA2-204ENST00000578519 UAP1L1Q3KQV9 507 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 CCSMST1Q4G0I0 132 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 PYCR3Q53H96 274 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 CPTPQ5TA50 214 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 KIAA1211LQ6NV74 962 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 GALNT18Q6P9A2 607 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 FAM83HQ6ZRV2 1179 aaPredicted RBP10.73□□□□□ -0.69
SKA2-204ENST00000578519 IKBIPQ70UQ0 350 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 CACUL1Q86Y37 369 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 SPPL2CQ8IUH8 684 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 SYNPOQ8N3V7 929 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 TRIML2Q8N7C3 387 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 OR8J2Q8NGG1 315 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 OR5AR1Q8NGP9 310 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 SCARF2Q96GP6 870 aaPredicted RBP10.73□□□□□ -0.69
SKA2-204ENST00000578519 WDR92Q96MX6 357 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 ZNF570Q96NI8 536 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 CCDC115Q96NT0 180 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 OR2M4Q96R27 311 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 BDH2Q9BUT1 245 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 C9orf16Q9BUW7 83 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 PHF7Q9BWX1 381 aaPredicted RBP10.73□□□□□ -0.69
SKA2-204ENST00000578519 MKRN2Q9H000 416 aaKnown RBP10.73□□□□□ -0.69
SKA2-204ENST00000578519 RAD21L1Q9H4I0 556 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 GORASP2Q9H8Y8 452 aa10.73□□□□□ -0.69
SKA2-204ENST00000578519 KCNK12Q9HB15 430 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms