RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PRDX1Q06830 199 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 NAE1Q13564 534 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 LY6DQ14210 128 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 USP10Q14694 798 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 SLC9A5Q14940 896 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 TBR1Q16650 682 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 HSP90B2PQ58FF3 399 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 UBAP2Q5T6F2 1119 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 LGSNQ5TDP6 509 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 FRMPD2BQ6IN97 320 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 RHBDD2Q6NTF9 364 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 AGTRAPQ6RW13 159 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 FAM198BQ6UWH4 519 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ZNF517Q6ZMY9 492 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 RNF44Q7L0R7 432 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 IQCKQ8N0W5 287 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 NKAPQ8N5F7 415 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ENDOVQ8N8Q3 282 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 TTC29Q8NA56 475 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 TSPAN17Q96FV3 270 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PKNOX2Q96KN3 472 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ZFYVE21Q9BQ24 234 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PLCD4Q9BRC7 762 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 GPR87Q9BY21 358 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 UNKQ9C0B0 810 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 CUEDC1Q9NWM3 386 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ANKMY1Q9P2S6 941 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 NDOR1Q9UHB4 597 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PCDHGA6Q9Y5G7 932 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 KLK4Q9Y5K2 254 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PCM1Q15154 2024 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 LOC105369274A0A096LPK9 316 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 LOC102723532A0A0G2JNH3 316 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 CDC7O00311 574 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 MAP2K7O14733 419 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PRB1P04280 392 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ENO2P09104 434 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 STMN1P16949 149 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ALAS2P22557 587 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 SLCO1A2P46721 670 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 AP1S2P56377 157 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ABATP80404 500 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 NFKB2Q00653 900 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ILF2Q12905 390 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 GRM7Q14831 915 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 DEFB109BQ30KR1 87 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 LINC00303Q3SY05 128 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 TCTE1Q5JU00 501 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 WASHC2DQ5SRD0 308 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 GRTP1Q5TC63 336 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 FAM69BQ5VUD6 431 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ZNF385CQ66K41 422 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 BORAQ6PGQ7 559 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 SBSNQ6UWP8 590 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 TTLL10Q6ZVT0 673 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 FRA10AC1Q70Z53 315 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PAQR7Q86WK9 346 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 OR4N4Q8N0Y3 316 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 CNPY4Q8N129 248 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PROKR1Q8TCW9 393 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ANKRD49Q8WVL7 239 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 PDLIM5Q96HC4 596 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 CATSPER2Q96P56 530 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 GBP5Q96PP8 586 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 GPR22Q99680 433 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 DPH2Q9BQC3 489 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 STMN4Q9H169 189 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 POPDC3Q9HBV1 291 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 ZNF446Q9NWS9 450 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 FETUBQ9UGM5 382 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 SNX7Q9UNH6 387 aa12.69□□□□□ -0.38
RPAIN-216ENST00000575599 FARSAQ9Y285 508 aaKnown RBP12.69□□□□□ -0.38
RPAIN-216ENST00000575599 H7BY64 318 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 HAT1O14929 419 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 RGS16O15492 202 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 FURINP09958 794 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 FAM87AP0C7U9 286 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 SPRP35270 261 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 ARSFP54793 590 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 DCDP81605 110 aaKnown RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 ZNF844Q08AG5 666 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 IL10RAQ13651 578 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 NCF4Q15080 339 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 MLIPQ5VWP3 458 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 ZNF425Q6IV72 752 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 CAPN13Q6MZZ7 669 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 FBXO42Q6P3S6 717 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 SYVN1Q86TM6 617 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 PLD3Q8IV08 490 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 RIBC1Q8N443 379 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 SPATA6LQ8N4H0 392 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 METTL27Q8N6F8 245 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 EPS8L3Q8TE67 593 aaKnown RBP12.68□□□□□ -0.38
RPAIN-216ENST00000575599 ZBTB9Q96C00 473 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 PYCR2Q96C36 320 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 PRAP1Q96NZ9 151 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 PAFAH2Q99487 392 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 TMEM109Q9BVC6 243 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 NLNQ9BYT8 704 aa12.68□□□□□ -0.38
RPAIN-216ENST00000575599 PCBD2Q9H0N5 130 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms