RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CACNA2D3Q8IZS8 1091 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 MREGQ8N565 214 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 TBC1D19Q8N5T2 526 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 ESX1Q8N693 406 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 OR1L3Q8NH93 324 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 ACMSDQ8TDX5 336 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 KCTD4Q8WVF5 259 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 PMEPA1Q969W9 287 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 PTERQ96BW5 349 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 RHBDF1Q96CC6 855 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 ZFYVE21Q9BQ24 234 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 EFHD1Q9BUP0 239 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 CAPS2Q9BXY5 557 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 UNKQ9C0B0 810 aaKnown RBP10.58□□□□□ -0.72
CHD3-216ENST00000573936 ALG9Q9H6U8 611 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 SLC6A20Q9NP91 592 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 IRAK4Q9NWZ3 460 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 EURLQ9NYK6 297 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 NUDT4Q9NZJ9 180 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 CD274Q9NZQ7 290 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 PILRAQ9UKJ1 303 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 KLHL20Q9Y2M5 609 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 DYRK1BQ9Y463 629 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 PCDHB3Q9Y5E6 796 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 SPTA1P02549 2419 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 MYO18BQ8IUG5 2567 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 NCF1BA6NI72 391 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 NCF1CA8MVU1 366 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 TXNDC9O14530 226 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 SLC28A2O43868 658 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 OR2B3O76000 313 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 SHBGP04278 402 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 KLK3P07288 261 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 NUDT17P0C025 328 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 NCF1P14598 390 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 NPPBP16860 134 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 GRK3P35626 688 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 GGT5P36269 586 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 ARSFP54793 590 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 IRF9Q00978 393 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 CLN3Q13286 438 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 PTCHD3Q3KNS1 767 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 YOD1Q5VVQ6 348 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 ZNF425Q6IV72 752 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 FBXO42Q6P3S6 717 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 RNF44Q7L0R7 432 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 ADCK2Q7Z695 626 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 THOC6Q86W42 341 aaKnown RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 CENPLQ8N0S6 344 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 RIBC1Q8N443 379 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 IL22RA1Q8N6P7 574 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 TTC29Q8NA56 475 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 PDPRQ8NCN5 879 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 NKD1Q969G9 470 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 PYCR2Q96C36 320 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 THAP11Q96EK4 314 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 LRFN5Q96NI6 719 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 ATOH8Q96SQ7 321 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 SELENOSQ9BQE4 189 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 ROPN1BQ9BZX4 212 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 ACTR5Q9H9F9 607 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 ROPN1Q9HAT0 212 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 ENAMQ9NRM1 1142 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 WDR70Q9NW82 654 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 ARGLU1Q9NWB6 273 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 WWOXQ9NZC7 414 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 PTBP2Q9UKA9 531 aaKnown RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 PADI1Q9ULC6 663 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 TMCO1Q9UM00 188 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 SRPK3Q9UPE1 567 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 HEMK1Q9Y5R4 338 aaPredicted RBP10.57□□□□□ -0.72
CHD3-216ENST00000573936 KCNE2Q9Y6J6 123 aa10.57□□□□□ -0.72
CHD3-216ENST00000573936 BSNQ9UPA5 3926 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 TLN1Q9Y490 2541 aaKnown RBP10.56□□□□□ -0.72
CHD3-216ENST00000573936 IGKV1-8A0A0C4DH67 115 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 A0A0J9YVX5 310 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 SUPT3HB4E1H0 165 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 H7BY64 318 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 ZSCAN9O15535 394 aaPredicted RBP10.56□□□□□ -0.72
CHD3-216ENST00000573936 ZNF749O43361 778 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 CTSVO60911 334 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 CDH16O75309 829 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 SUPT3HO75486 399 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 RFPL1O75677 317 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 STK16O75716 305 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 WDR47O94967 919 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 TIAF1O95411 115 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 NTRK1P04629 796 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 SLC6A12P48065 614 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 CCR8P51685 355 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 RPS15AP62244 130 aaKnown RBP10.56□□□□□ -0.72
CHD3-216ENST00000573936 IFFO1Q0D2I5 559 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 GRM7Q14831 915 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 DEFB110Q30KQ9 67 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 FAM214AQ32MH5 1076 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 MANEAQ5SRI9 462 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 PRICKLE2Q7Z3G6 844 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 ZNF655Q8N720 491 aaPredicted RBP10.56□□□□□ -0.72
CHD3-216ENST00000573936 ABHD11Q8NFV4 315 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 SLC5A11Q8WWX8 675 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms