RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PHKG1Q16816 387 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 PRR30Q53SZ7 412 aaPredicted RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 HP1BP3Q5SSJ5 553 aaPredicted RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 PRMT9Q6P2P2 845 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 MBOAT1Q6ZNC8 495 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 SHISA6Q6ZSJ9 500 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 VN1R4Q7Z5H5 301 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 HPS6Q86YV9 775 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 CSNK1A1LQ8N752 337 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 AMER3Q8N944 861 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 NAPGQ99747 312 aaPredicted RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 SOX17Q9H6I2 414 aaPredicted RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 ZBTB20Q9HC78 741 aaPredicted RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 TRMT6Q9UJA5 497 aaKnown RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 FBXL4Q9UKA2 621 aa16.6■□□□□ 0.25
SMG6-214ENST00000573827 NXT1Q9UKK6 140 aaKnown RBP16.6■□□□□ 0.25
SMG6-214ENST00000573827 ZNF839A8K0R7 811 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 E7ESA3 106 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 PEX12O00623 359 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 DPM1O60762 260 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 ALOX12BO75342 701 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 IGHEP01854 428 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 EIF2S1P05198 315 aaKnown RBP16.59■□□□□ 0.25
SMG6-214ENST00000573827 FDXRP22570 491 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 ITGA8P53708 1063 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 TBPL1P62380 186 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 KLC1Q07866 573 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 Q0VFX4 171 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 MUM1Q2TAK8 710 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 CRB2Q5IJ48 1285 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 PLD3Q8IV08 490 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 SHISA5Q8N114 240 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 OR11G2Q8NGC1 345 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 STT3BQ8TCJ2 826 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 PNPLA2Q96AD5 504 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 OLFM1Q99784 485 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 MCMBPQ9BTE3 642 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 SGPP1Q9BX95 441 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 ZNF304Q9HCX3 659 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 TAS2R13Q9NYV9 303 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 IKZF3Q9UKT9 509 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 CHMP2BQ9UQN3 213 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 MRPS2Q9Y399 296 aaKnown RBP16.59■□□□□ 0.25
SMG6-214ENST00000573827 PSAT1Q9Y617 370 aa16.59■□□□□ 0.25
SMG6-214ENST00000573827 A0A1W2PQ72 361 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 H7BY64 318 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 SLC16A5O15375 505 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 CCNDBP1O95273 360 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 SYF2O95926 243 aaKnown RBP16.58■□□□□ 0.24
SMG6-214ENST00000573827 C8GP07360 202 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 ZGLP1P0C6A0 271 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 SLC26A3P40879 764 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 UQCRFS1P47985 274 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 SP140Q13342 867 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 DSG2Q14126 1118 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 FASTKD3Q14CZ7 662 aaKnown RBP16.58■□□□□ 0.24
SMG6-214ENST00000573827 ATG9BQ674R7 924 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 LRRC8EQ6NSJ5 796 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 LAPTM4BQ86VI4 370 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 PDIK1LQ8N165 341 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 CLEC1AQ8NC01 280 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 CPT1CQ8TCG5 803 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 LRRC39Q96DD0 335 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 MVB12AQ96EY5 273 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 CCDC138Q96M89 665 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 RUNDC3BQ96NL0 473 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 PRAP1Q96NZ9 151 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 MFRPQ9BY79 579 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 PARVBQ9HBI1 364 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 ATP13A2Q9NQ11 1180 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 SEMA3GQ9NS98 782 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 LUZP4Q9P127 313 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 CDC23Q9UJX2 597 aa16.58■□□□□ 0.24
SMG6-214ENST00000573827 TEX15Q9BXT5 2789 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 KCNE1BA0A087WTH5 132 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 TTLL8A6PVC2 850 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 CCDC188H7C350 402 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 RPL21P46778 160 aaKnown RBP16.57■□□□□ 0.24
SMG6-214ENST00000573827 CSNK1G2P78368 415 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 AIMP2Q13155 320 aaKnown RBP16.57■□□□□ 0.24
SMG6-214ENST00000573827 TSTA3Q13630 321 aaPredicted RBP16.57■□□□□ 0.24
SMG6-214ENST00000573827 INPP5JQ15735 1006 aaPredicted RBP16.57■□□□□ 0.24
SMG6-214ENST00000573827 HIF1AQ16665 826 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 PLEKHN1Q494U1 663 aaPredicted RBP16.57■□□□□ 0.24
SMG6-214ENST00000573827 VWA2Q5GFL6 755 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 HECTD2Q5U5R9 776 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 GARNL3Q5VVW2 1013 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 PRAMEF13Q5VWM6 474 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 UGT3A1Q6NUS8 523 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 IGFL2Q6UWQ7 119 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 TMEM207Q6UWW9 146 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 GALNT11Q8NCW6 608 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 LINGO1Q96FE5 620 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 CFAP36Q96G28 342 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 CABS1Q96KC9 395 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 CCDC177Q9NQR7 707 aaPredicted RBP16.57■□□□□ 0.24
SMG6-214ENST00000573827 MOCS1Q9NZB8 636 aa16.57■□□□□ 0.24
SMG6-214ENST00000573827 ZNF282Q9UDV7 671 aaPredicted RBP16.57■□□□□ 0.24
SMG6-214ENST00000573827 FFAR3O14843 346 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 GPR42O15529 346 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms