RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CALML6Q8TD86 181 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 SLCO2A1Q92959 643 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 PDLIM2Q96JY6 352 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 CAPZA3Q96KX2 299 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 RAB11FIP5Q9BXF6 653 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 CCDC68Q9H2F9 335 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 FBXO6Q9NRD1 293 aaPredicted RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 INTS7Q9NVH2 962 aaKnown RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 IRAK4Q9NWZ3 460 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 EURLQ9NYK6 297 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 ASIC3Q9UHC3 531 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 PCYOX1Q9UHG3 505 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 TCFL5Q9UL49 500 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 SNX7Q9UNH6 387 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 RUVBL2Q9Y230 463 aaKnown RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 MAN2B2Q9Y2E5 1009 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 TMA7Q9Y2S6 64 aaKnown RBP7.14□□□□□ -1.27
NUP88-205ENST00000572809 SAR1BQ9Y6B6 198 aa7.14□□□□□ -1.27
NUP88-205ENST00000572809 COL6A6A6NMZ7 2263 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 ATMQ13315 3056 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 BAHCC1Q9P281 2608 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 TARM1B6A8C7 271 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 C9J4A7 227 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 ZSCAN9O15535 394 aaPredicted RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 KLF4O43474 513 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 ZBTB14O43829 449 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 PSIP1O75475 530 aaKnown RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 CTSBP07858 339 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 CD63P08962 238 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 CBSLP0DN79 551 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 PGAM1P18669 254 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 IVDP26440 423 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 ATP5DP30049 168 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 CBSP35520 551 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 GRIA3P42263 894 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 SLC1A2P43004 574 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 PAFAH1B1P43034 410 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 CCL11P51671 97 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 CLCN7P51798 805 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 ARSFP54793 590 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 DCDP81605 110 aaKnown RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 PTK6Q13882 451 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 CYP2A13Q16696 494 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 TTLL9Q3SXZ7 439 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 ACSBG2Q5FVE4 666 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 C1orf189Q5VU69 101 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 FCRL6Q6DN72 434 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 ZNF470Q6ECI4 717 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 RHBDD2Q6NTF9 364 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 TCTN3Q6NUS6 607 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 ZNF549Q6P9A3 640 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 CYHR1Q6ZMK1 362 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 SYDE1Q6ZW31 735 aaPredicted RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 NEK10Q6ZWH5 1172 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 KCNMB4Q86W47 210 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 CREG2Q8IUH2 290 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 APLFQ8IW19 511 aaPredicted RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 KLHL7Q8IXQ5 586 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 ZNF655Q8N720 491 aaPredicted RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 GALNT11Q8NCW6 608 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 OR2A1Q8NGT9 310 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 OR9A1PQ8NGU1 263 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 GABPB2Q8TAK5 448 aaPredicted RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 DENND1AQ8TEH3 1009 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 INPP5DQ92835 1189 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 RUNDC3BQ96NL0 473 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 NAPGQ99747 312 aaPredicted RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 EBNA1BP2Q99848 306 aaKnown RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 C17orf62Q9BQA9 187 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 NDC1Q9BTX1 674 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 DHRS4Q9BTZ2 278 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 IARS2Q9NSE4 1012 aaKnown RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 TXLNGQ9NUQ3 528 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 KLHL42Q9P2K6 505 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 DHCR7Q9UBM7 475 aaKnown RBP7.13□□□□□ -1.27
NUP88-205ENST00000572809 ANAPC2Q9UJX6 822 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 TLK1Q9UKI8 766 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 FBXO5Q9UKT4 447 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 SRPK3Q9UPE1 567 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 DHRS7Q9Y394 339 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 RNF114Q9Y508 228 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 COMMD10Q9Y6G5 202 aa7.13□□□□□ -1.27
NUP88-205ENST00000572809 KALRNO60229 2985 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 SPTBP11277 2137 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 CFAP46Q8IYW2 2715 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 LOC100289279A0A1B0GTE1 492 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 A0A1W2PPV9 198 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 KRT87PA6NCN2 255 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 ARGFXA6NJG6 315 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 SMAD7O15105 426 aaKnown RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 SRPX2O60687 465 aaPredicted RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 VPS26AO75436 327 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 RFPL1O75677 317 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 KLF7O75840 302 aaPredicted RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 WISP1O95388 367 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 TTC4O95801 387 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 CATP04040 527 aaKnown RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 F7P08709 466 aaPredicted RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 MPC1LP0DKB6 136 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 ERVK-10P10266 1014 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms