RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 PGFP49763 221 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 ADPRHP54922 357 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 PLTPP55058 493 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CDH4P55283 916 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 SHC2P98077 582 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CFHR3Q02985 330 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 AP1B1Q10567 949 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 LMAN2Q12907 356 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CASP8Q14790 479 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 PTPRRQ15256 657 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 HSP90B2PQ58FF3 399 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 C9orf152Q5JTZ5 239 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 MPP7Q5T2T1 576 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 RNASEH2BQ5TBB1 312 aaKnown RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 FAM72AQ5TYM5 149 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 KRT80Q6KB66 452 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 FAM72DQ6L9T8 149 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 RHBDF2Q6PJF5 856 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 IL20RBQ6UXL0 311 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 LRIG3Q6UXM1 1119 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CENPUQ71F23 418 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 SETD3Q86TU7 594 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 NLRP14Q86W24 1093 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 FAM72BQ86X60 149 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 FAM217AQ8IXS0 508 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CCDC13Q8IYE1 715 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 ZNF683Q8IZ20 524 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 TDHQ8IZJ6 230 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 OR8H3Q8N146 312 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 BBS5Q8N3I7 341 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 AMER2Q8N7J2 671 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 HJURPQ8NCD3 748 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CCNYQ8ND76 341 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 DNAAF1Q8NEP3 725 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 NSMCE1Q8WV22 266 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 OTUB2Q96DC9 234 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 LRRC39Q96DD0 335 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 ZNF764Q96H86 408 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 ZNF599Q96NL3 588 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 RPRD1AQ96P16 312 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 WDFY2Q96P53 400 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 PRMT1Q99873 361 aaKnown RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 FUT8Q9BYC5 575 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 POLR1BQ9H9Y6 1135 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 XAB2Q9HCS7 855 aaKnown RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 AURKAIP1Q9NWT8 199 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 DLGAP2Q9P1A6 1054 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 UPB1Q9UBR1 384 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 HAO1Q9UJM8 370 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 A4GNTQ9UNA3 340 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CCL27Q9Y4X3 112 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 DOCK4Q8N1I0 1966 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 A0A1B0GVM2 712 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 A0A1W2PPC1 479 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 GOLGA6L10A6NI86 522 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 RNF103O00237 685 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 MATN3O15232 486 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 YY2O15391 372 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 PAX4O43316 350 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 RAMP2O60895 175 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 PLATP00750 562 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 IVLP07476 585 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 NUDT17P0C025 328 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 NPSP0C0P6 89 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 MLNP12872 115 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 PHBP35232 272 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 RPL22P35268 128 aaKnown RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 AVPR1AP37288 418 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 SKIV2L2P42285 1042 aaKnown RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 IFNAR2P48551 515 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF41P51814 821 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 PMS2P54278 862 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 BASP1P80723 227 aaKnown RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 MRPS25P82663 173 aaKnown RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 PPARDQ03181 441 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 IL10RBQ08334 325 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 PRPSAP1Q14558 356 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 RFTN1Q14699 578 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 DUSP6Q16828 381 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 PARP6Q2NL67 630 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 DNAJC21Q5F1R6 531 aaKnown RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 ANKRD20A2Q5SQ80 823 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 SERTAD4-AS1Q5TG53 156 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 ANKRD20A1Q5TYW2 823 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 ANKRD20A3Q5VUR7 823 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 FBXL22Q6P050 247 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 USP51Q70EK9 711 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 RNF144BQ7Z419 303 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 TMEM150AQ86TG1 271 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 PDIK1LQ8N165 341 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 NAT8LQ8N9F0 302 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 MCUQ8NE86 351 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 PRCCQ92733 491 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 MRPL38Q96DV4 380 aaKnown RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 P2RY11Q96G91 374 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 FBXL20Q96IG2 436 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF845Q96IR2 970 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 GPR78Q96P69 363 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 FYTTD1Q96QD9 318 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms