RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SKIV2L2P42285 1042 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 PGGT1BP53609 377 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 PRDX1Q06830 199 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 TSTA3Q13630 321 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 ZXDCQ2QGD7 858 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 FAM214AQ32MH5 1076 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 TUBB8Q3ZCM7 444 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 CCDC137Q6PK04 289 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 CPNE9Q8IYJ1 553 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 ZADH2Q8N4Q0 377 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 CSNK1A1LQ8N752 337 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 CATSPER1Q8NEC5 780 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 PPP4R1Q8TF05 950 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 ZNF160Q9HCG1 818 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 MRPS30Q9NP92 439 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 SEMA3GQ9NS98 782 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 INTS10Q9NVR2 710 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 SLC17A6Q9P2U8 582 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 C3orf18Q9UK00 162 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 SMAPO00193 183 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 PHF2O75151 1096 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 IPO13O94829 963 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 HAUS5O94927 633 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 HPP00738 406 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 PIM1P11309 404 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 FBLP22087 321 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 RPA3P35244 121 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 SLC26A3P40879 764 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 GLRBP48167 497 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 FNTAP49354 379 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 GNG11P61952 73 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 DSG2Q14126 1118 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 ARHGAP19Q14CB8 494 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 MUM1Q2TAK8 710 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 MSS51Q4VC12 460 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 C4orf17Q53FE4 359 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 PRMT9Q6P2P2 845 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 MBOAT1Q6ZNC8 495 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 NEK10Q6ZWH5 1172 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 PRSS41Q7RTY9 318 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 VN1R4Q7Z5H5 301 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 ZC3H7AQ8IWR0 971 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 RAB42Q8N4Z0 105 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 FBXO15Q8NCQ5 510 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 MAGEC3Q8TD91 643 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 KCNJ9Q92806 393 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 THOC3Q96J01 351 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 MACROD1Q9BQ69 325 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 SLC29A3Q9BZD2 475 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 LHPPQ9H008 270 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 XAB2Q9HCS7 855 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 ABCF3Q9NUQ8 709 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 ZNF282Q9UDV7 671 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 PCYOX1Q9UHG3 505 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 ADAMTS6Q9UKP5 1117 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 FBXO5Q9UKT4 447 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 DHRS7Q9Y394 339 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 MRFAP1Q9Y605 127 aa13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 COPG1Q9Y678 874 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-211ENST00000569653 MYO9AB2RTY4 2548 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 A0A0A6YYC8 382 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 A0A1W2PQ72 361 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 CTAGE9A4FU28 777 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 ANKUB1A6NFN9 424 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 IDSB3KWA1 339 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 E5RI56 91 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 I3L1I5 382 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 JRKO75564 520 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 CATP04040 527 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 MPC1LP0DKB6 136 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 ACPPP15309 386 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 SOX11P35716 441 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 EMP3P54852 163 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 MAT1AQ00266 395 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 EEF1A2Q05639 463 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 RBM20Q5T481 1227 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 RNASEH2BQ5TBB1 312 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 AGAP7PQ5VUJ5 663 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 ARMC3Q5W041 872 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 FAAH2Q6GMR7 532 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 LINC00696Q6ZRV3 163 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 KCNMB4Q86W47 210 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 IGDCC3Q8IVU1 814 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 CABS1Q96KC9 395 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 AGAP4Q96P64 663 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 NDNQ99608 321 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 NAPGQ99747 312 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 WDR83Q9BRX9 315 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 AARSD1Q9BTE6 412 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 FAM114A2Q9NRY5 505 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 C20orf96Q9NUD7 363 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 SAMD15Q9P1V8 674 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 TRPC4Q9UBN4 977 aa13.15□□□□□ -0.3
GTF3C1-211ENST00000569653 H7BY64 318 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 MAP2K7O14733 419 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 SYF2O95926 243 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 PRR35P0CG20 571 aa13.14□□□□□ -0.31
GTF3C1-211ENST00000569653 PAMP19021 973 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms