RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 R3HCC1LQ7Z5L2 792 aaKnown RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 FAM217AQ8IXS0 508 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CPXM2Q8N436 756 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 GLB1L3Q8NCI6 653 aaPredicted RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ZNF555Q8NEP9 628 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TMEM159Q96B96 161 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 THAP11Q96EK4 314 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ZBP1Q9H171 429 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 RMND5AQ9H871 391 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 RDH14Q9HBH5 336 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CD320Q9NPF0 282 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 SH3BP4Q9P0V3 963 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ABHD14A-ACY1A0A1B0GW23 586 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 GNG14A0A1W2PPG7 69 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TRIM43BA6NCK2 446 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TRIM64A6NGJ6 449 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TRIM64BA6NI03 449 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 EVPLLA8MZ36 301 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CTSAP10619 480 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 HLA-EP13747 358 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CD22P20273 847 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 NNMTP40261 264 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CSNK1DP48730 415 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ENTPD1P49961 510 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CLDN8P56748 225 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ADARB1P78563 741 aaKnown RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 IL5RAQ01344 420 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 HKDC1Q2TB90 917 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CCNYL2Q5T2Q4 361 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 MPP7Q5T2T1 576 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 IER5LQ5T953 404 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 XKR5Q6UX68 686 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CCDC149Q6ZUS6 474 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ZNF551Q7Z340 670 aaPredicted RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 C8orf59Q8N0T1 100 aaPredicted RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 PGBD3Q8N328 593 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ASZ1Q8WWH4 475 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 TRIM43Q96BQ3 446 aaPredicted RBP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ECHDC3Q96DC8 303 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 HSPBAP1Q96EW2 488 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ZFYVE19Q96K21 471 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 HEPHQ9BQS7 1158 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 EMILIN2Q9BXX0 1053 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 AMBRA1Q9C0C7 1298 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 RIBC2Q9H4K1 309 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 CAPN10Q9HC96 672 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 SERHLQ9NQF3 203 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 SPHK2Q9NRA0 654 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00558-201ENST00000569422 FAM118AQ9NWS6 357 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 DNAJB9Q9UBS3 223 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 DGKBQ9Y6T7 804 aa8.49□□□□□ -1.05
LINC00558-201ENST00000569422 ARHGEF33A8MVX0 844 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 CLIC1O00299 241 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 TOR1BO14657 336 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 MAGEB3O15480 346 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 XPNPEP2O43895 674 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 FTH1P02794 183 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 C8GP07360 202 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 CTSLP07711 333 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 RHOP08100 348 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ENGP17813 658 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 MATN1P21941 496 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 MRPL19P49406 292 aaKnown RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 PFN3P60673 137 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ACSM2AQ08AH3 577 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 DOC2AQ14183 400 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 LRRC26Q2I0M4 334 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ZNF284Q2VY69 593 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 SPATS1Q496A3 300 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 IRAK1BP1Q5VVH5 260 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ACSM2BQ68CK6 577 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 THOC7Q6I9Y2 204 aaKnown RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 TMEM220Q6QAJ8 160 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 GRASPQ7Z6J2 395 aaPredicted RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 THAP5Q7Z6K1 395 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ADIPOR2Q86V24 386 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 THOC6Q86W42 341 aaKnown RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ERI1Q8IV48 349 aaKnown RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ZDHHC21Q8IVQ6 265 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 SYTL1Q8IYJ3 562 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 EID3Q8N140 333 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 CNIH3Q8TBE1 160 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 SNX19Q92543 992 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 MAL2Q969L2 176 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 GORASP2Q9H8Y8 452 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 SGK2Q9HBY8 427 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 RHBDL2Q9NX52 303 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 BTBD3Q9Y2F9 522 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 AGAP14A8MT82 685 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 MAGEB17A8MXT2 336 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ETHE1O95571 254 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 SLC16A8O95907 504 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 NUDT7P0C024 238 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 CBSLP0DN79 551 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 LAMP1P11279 417 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ZNF182P17025 639 aaPredicted RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 AMD1P17707 334 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 CD247P20963 164 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms