RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 NT5MQ9NPB1 228 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 HOMER3Q9NSC5 361 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 AMACRQ9UHK6 382 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF148Q9UQR1 794 aa9.21□□□□□ -0.94
CAPN3-216ENST00000567071 DNMT3AQ9Y6K1 912 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-216ENST00000567071 A8MUI8 341 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 RAD51CO43502 376 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 CDC40O60508 579 aaKnown RBP eCLIP9.2□□□□□ -0.94
CAPN3-216ENST00000567071 ONECUT2O95948 504 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 MT-CYBP00156 380 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-216ENST00000567071 RHOXF2BP0C7M4 288 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 ETS1P14921 441 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 CES1P23141 567 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 RBL1P28749 1068 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 PTGER1P34995 402 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 FNTAP49354 379 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 VPS41P49754 854 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 GDF10P55107 478 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 DR1Q01658 176 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 EEF1A2Q05639 463 aaKnown RBP9.2□□□□□ -0.94
CAPN3-216ENST00000567071 OR1C1Q15619 314 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 TRIP13Q15645 432 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-216ENST00000567071 KRTAP24-1Q3LI83 254 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 CHRFAM7AQ494W8 412 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 YOD1Q5VVQ6 348 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-216ENST00000567071 METRNLQ641Q3 311 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 HEPHL1Q6MZM0 1159 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 FAM83HQ6ZRV2 1179 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-216ENST00000567071 COX15Q7KZN9 410 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 GSTA5Q7RTV2 222 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 GALNTL5Q7Z4T8 443 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 WDR53Q7Z5U6 358 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-216ENST00000567071 FGD2Q7Z6J4 655 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 PRUNE1Q86TP1 453 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 HIPK1Q86Z02 1210 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 MMGT1Q8N4V1 131 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 FAM71DQ8N9W8 422 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 TFB1MQ8WVM0 346 aaKnown RBP9.2□□□□□ -0.94
CAPN3-216ENST00000567071 PIGTQ969N2 578 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 SCMH1Q96GD3 660 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 PIP5K1AQ99755 562 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 RHOXF2Q9BQY4 288 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 LRRC1Q9BTT6 524 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 HES7Q9BYE0 225 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 CEP41Q9BYV8 373 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 CHRNA10Q9GZZ6 450 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 ZFYVE1Q9HBF4 777 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 PCDH9Q9HC56 1237 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 ACTR10Q9NZ32 417 aa9.2□□□□□ -0.94
CAPN3-216ENST00000567071 IGHV1-45A0A0A0MS14 117 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 KLHL33A6NCF5 533 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 VSTM2BA6NLU5 285 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 EFCAB8A8MWE9 144 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 FAM47E-STBD1D6RA91 191 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 KCNK1O00180 336 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 DNAJB6O75190 326 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 GAS8O95995 478 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 IFNB1P01574 187 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 SLC4A1P02730 911 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 ZGLP1P0C6A0 271 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 SLC7A5Q01650 507 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 OC90Q02509 493 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-216ENST00000567071 PPIDQ08752 370 aaKnown RBP9.19□□□□□ -0.94
CAPN3-216ENST00000567071 TUBA3CQ13748 450 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 PPP1R7Q15435 360 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 MAPKAPK3Q16644 382 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 KHDC1Q4VXA5 237 aaKnown RBP9.19□□□□□ -0.94
CAPN3-216ENST00000567071 GPRC6AQ5T6X5 926 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 ARHGAP11AQ6P4F7 1023 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 TUBA3EQ6PEY2 450 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 DRICH1Q6PGQ1 229 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-216ENST00000567071 KDELC1Q6UW63 502 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 UNC5DQ6UXZ4 953 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 BZW1Q7L1Q6 419 aaKnown RBP9.19□□□□□ -0.94
CAPN3-216ENST00000567071 AMIGO1Q86WK6 493 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 BEST3Q8N1M1 668 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 TTC29Q8NA56 475 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-216ENST00000567071 GPR26Q8NDV2 337 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 MDS2Q8NDY4 140 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 STT3BQ8TCJ2 826 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 GRK7Q8WTQ7 553 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 SIGLEC12Q96PQ1 595 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 VPS35Q96QK1 796 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 OLFM1Q99784 485 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 TDRD1Q9BXT4 1180 aaKnown RBP9.19□□□□□ -0.94
CAPN3-216ENST00000567071 PLA2G12AQ9BZM1 189 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 CUTCQ9NTM9 273 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 NFKBIL1Q9UBC1 381 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-216ENST00000567071 ZNF282Q9UDV7 671 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-216ENST00000567071 PCYOX1Q9UHG3 505 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 ADGRE2Q9UHX3 823 aa9.19□□□□□ -0.94
CAPN3-216ENST00000567071 A0A0J9YY10 115 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 HACD1B0YJ81 288 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 BTN3A3O00478 584 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 ABCA1O95477 2261 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 CNOT4O95628 575 aaKnown RBP9.18□□□□□ -0.94
CAPN3-216ENST00000567071 KRT14P02533 472 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 CELA2AP08217 269 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 ZSCAN5DPP0CG00 497 aa9.18□□□□□ -0.94
CAPN3-216ENST00000567071 TACR1P25103 407 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms