RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PPP6CO00743 305 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 AZIN1O14977 448 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 OR1F1O43749 312 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 WFS1O76024 890 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 KRT6AP02538 564 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 KRT6BP04259 564 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 VIMP08670 466 aaKnown RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 UROSP10746 265 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 THRAP10827 490 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 HOXB3P14651 431 aaPredicted RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 JUPP14923 745 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 EZRP15311 586 aaKnown RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 ST6GAL1P15907 406 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 GSTM2P28161 218 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CSF2RBP32927 897 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CSTF2P33240 577 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDH1-208ENST00000565810 MLLT3P42568 568 aaPredicted RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 KRT6CP48668 564 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 SEPHS1P49903 392 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 NOVA1P51513 510 aaKnown RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 INHBCP55103 352 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 RPS15AP62244 130 aaKnown RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 CSNK1G2P78368 415 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 HSD11B2P80365 405 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 SIM1P81133 766 aaPredicted RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 CFHR1Q03591 330 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 RELAQ04206 551 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 PCDH1Q08174 1060 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 IFT88Q13099 833 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CPSF6Q16630 551 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDH1-208ENST00000565810 OTOGLQ3ZCN5 2332 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 GGTA1PQ4G0N0 100 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 SH2D4BQ5SQS7 431 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CATSPEREQ5SY80 951 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 C10orf62Q5T681 223 aaPredicted RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 PHF19Q5T6S3 580 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 GRHL2Q6ISB3 625 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 ZNF425Q6IV72 752 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 MED27Q6P2C8 311 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CYB5D1Q6P9G0 228 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 TMIGD1Q6UXZ0 262 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 RGS9BPQ6ZS82 235 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 SYVN1Q86TM6 617 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CHCHD4Q8N4Q1 142 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CDYL2Q8N8U2 506 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 DCBLD1Q8N8Z6 715 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 C19orf47Q8N9M1 422 aaKnown RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 L3MBTL4Q8NA19 623 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 OR4F6Q8NGB9 312 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 OR4K1Q8NGD4 311 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 FLVCR1-AS1Q8TAF5 88 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 AGAP11Q8TF27 550 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 RERGQ96A58 199 aaPredicted RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 FAM122AQ96E09 287 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 THAP11Q96EK4 314 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 WDR34Q96EX3 536 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 FAR2Q96K12 515 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CDK15Q96Q40 435 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 RTKNQ9BST9 563 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 SHCBP1LQ9BZQ2 653 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 STRADBQ9C0K7 418 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CHRNA10Q9GZZ6 450 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 ELOVL6Q9H5J4 265 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 NT5DC2Q9H857 520 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 FANCEQ9HB96 536 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 CUEDC1Q9NWM3 386 aaPredicted RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 IRAK4Q9NWZ3 460 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 GEMIN8Q9NWZ8 242 aaKnown RBP7.48□□□□□ -1.21
CDH1-208ENST00000565810 PDP2Q9P2J9 529 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 TRPS1Q9UHF7 1281 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 ADGRE2Q9UHX3 823 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 SNX6Q9UNH7 406 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 KLHL20Q9Y2M5 609 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 RNF11Q9Y3C5 154 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 RAP2CQ9Y3L5 183 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 TRAF6Q9Y4K3 522 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 KLK4Q9Y5K2 254 aa7.48□□□□□ -1.21
CDH1-208ENST00000565810 LRP4O75096 1905 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 IGHV5-51A0A0C4DH38 117 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 IGKV1-8A0A0C4DH67 115 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 A0A0J9YVX5 310 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 IGHV5-10-1A0A0J9YXX1 117 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 SPAARA0A1B0GVQ0 90 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 TRBC2A0A5B9 178 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 FEZF1A0PJY2 475 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 OR2A25A4D2G3 310 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 SLCO1B7G3V0H7 640 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 H0YIV9 168 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 TM4SF5O14894 197 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 ITM2AO43736 263 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 KIF1CO43896 1103 aaKnown RBP7.47□□□□□ -1.21
CDH1-208ENST00000565810 SRPX2O60687 465 aaPredicted RBP7.47□□□□□ -1.21
CDH1-208ENST00000565810 SNNO75324 88 aaPredicted RBP7.47□□□□□ -1.21
CDH1-208ENST00000565810 ULK1O75385 1050 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 LYPLA1O75608 230 aaPredicted RBP7.47□□□□□ -1.21
CDH1-208ENST00000565810 OR4F21O95013 312 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 MT-CO3P00414 261 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 CAPN1P07384 714 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 CHRNGP07510 517 aa7.47□□□□□ -1.21
CDH1-208ENST00000565810 FGF4P08620 206 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms