RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 FRG2BQ96QU4 278 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 TMEM120AQ9BXJ8 343 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 TWSG1Q9GZX9 223 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 MEAF6Q9HAF1 191 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 TMEM9BQ9NQ34 198 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 SEMA4GQ9NTN9 838 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 MRGBPQ9NV56 204 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 TMEM184CQ9NVA4 438 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 GEMIN8Q9NWZ8 242 aaKnown RBP12.34□□□□□ -0.43
CLK3-214ENST00000564096 ADGRE2Q9UHX3 823 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 ZNF225Q9UK10 706 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 TRIM33Q9UPN9 1127 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 ARL2BPQ9Y2Y0 163 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 DNAJC15Q9Y5T4 150 aa12.34□□□□□ -0.43
CLK3-214ENST00000564096 KCNE1BA0A087WTH5 132 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 A0A1B0GTL3 188 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 SLC28A1O00337 649 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 MANBAO00462 879 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 MAP3K7O43318 606 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 RGS14O43566 566 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.44
CLK3-214ENST00000564096 PCNAP12004 261 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 TYRP1P17643 537 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 CDH3P22223 829 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 ALDH4A1P30038 563 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 FOXA1P55317 472 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 BTKQ06187 659 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 SPEM2Q0P670 501 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 CSTF3Q12996 717 aaKnown RBP12.33□□□□□ -0.44
CLK3-214ENST00000564096 CATSPEREQ5SY80 951 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 TMIGD1Q6UXZ0 262 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 ATG14Q6ZNE5 492 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 SPRED1Q7Z699 444 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 PLXDC1Q8IUK5 500 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 GBP7Q8N8V2 638 aaPredicted RBP12.33□□□□□ -0.44
CLK3-214ENST00000564096 RFWD2Q8NHY2 731 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 C10orf82Q8WW14 230 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 USP7Q93009 1102 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 RILPQ96NA2 401 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 OR2A14Q96R47 310 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 NRTNQ99748 197 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 DPH7Q9BTV6 452 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 RAB33BQ9H082 229 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 TNFRSF12AQ9NP84 129 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 SLC6A20Q9NP91 592 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 TCF7L2Q9NQB0 619 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 CUEDC1Q9NWM3 386 aaPredicted RBP12.33□□□□□ -0.44
CLK3-214ENST00000564096 FTSJ1Q9UET6 329 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 ZNF490Q9ULM2 529 aaPredicted RBP12.33□□□□□ -0.44
CLK3-214ENST00000564096 SH2B3Q9UQQ2 575 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 BTRCQ9Y297 605 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 TSC22D4Q9Y3Q8 395 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 TIMM22Q9Y584 194 aa12.33□□□□□ -0.44
CLK3-214ENST00000564096 TMEM131Q92545 1883 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 IGHV1OR21-1A0A087WYE8 117 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 TRBC2A0A5B9 178 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 EME2A4GXA9 379 aaPredicted RBP12.32□□□□□ -0.44
CLK3-214ENST00000564096 TLCD2A6NGC4 264 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 H7BY64 318 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 RRP9O43818 475 aaKnown RBP12.32□□□□□ -0.44
CLK3-214ENST00000564096 DCTN3O75935 186 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 CKMT1AP12532 417 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 CD22P20273 847 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 RPS15AP62244 130 aaKnown RBP12.32□□□□□ -0.44
CLK3-214ENST00000564096 DDX39BQ13838 428 aaKnown RBP12.32□□□□□ -0.44
CLK3-214ENST00000564096 NR6A1Q15406 480 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 SF3A2Q15428 464 aaKnown RBP12.32□□□□□ -0.44
CLK3-214ENST00000564096 TERF2Q15554 542 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 CLPPQ16740 277 aaPredicted RBP12.32□□□□□ -0.44
CLK3-214ENST00000564096 PROX2Q3B8N5 592 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 UGT3A2Q3SY77 523 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 ATP6AP1LQ52LC2 224 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 XKR7Q5GH72 579 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 NXNQ6DKJ4 435 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 EPGNQ6UW88 154 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 PIGWQ7Z7B1 504 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 FAM129CQ86XR2 697 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 LAS2Q8IYD9 372 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 ACTRT2Q8TDY3 377 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 CNDP2Q96KP4 475 aaKnown RBP12.32□□□□□ -0.44
CLK3-214ENST00000564096 PPP3R2Q96LZ3 170 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 PRAP1Q96NZ9 151 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 DPYSL5Q9BPU6 564 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 CENPKQ9BS16 269 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 CCDC28BQ9BUN5 200 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 NT5DC2Q9H857 520 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 BRF2Q9HAW0 419 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 NMRK1Q9NWW6 199 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 EPHA6Q9UF33 1036 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 KLK4Q9Y5K2 254 aa12.32□□□□□ -0.44
CLK3-214ENST00000564096 GON4LQ3T8J9 2241 aa12.31□□□□□ -0.44
CLK3-214ENST00000564096 GOLGA8QA0A0J9YX86 632 aa12.31□□□□□ -0.44
CLK3-214ENST00000564096 CPED1A4D0V7 1026 aa12.31□□□□□ -0.44
CLK3-214ENST00000564096 GOLGA8OA6NCC3 632 aa12.31□□□□□ -0.44
CLK3-214ENST00000564096 ANKDD1BA6NHY2 528 aa12.31□□□□□ -0.44
CLK3-214ENST00000564096 GOLGA8NF8WBI6 632 aa12.31□□□□□ -0.44
CLK3-214ENST00000564096 CAPN5O15484 640 aaPredicted RBP12.31□□□□□ -0.44
CLK3-214ENST00000564096 RSL1D1O76021 490 aaKnown RBP12.31□□□□□ -0.44
CLK3-214ENST00000564096 LDOC1O95751 146 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms