RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 IMMP1LQ96LU5 166 aa17.72■□□□□ 0.43
NME3-204ENST00000563498 BIRC8Q96P09 236 aa17.72■□□□□ 0.43
NME3-204ENST00000563498 OR2A5Q96R48 311 aa17.72■□□□□ 0.43
NME3-204ENST00000563498 ACAT2Q9BWD1 397 aa17.72■□□□□ 0.43
NME3-204ENST00000563498 IGKV1-8A0A0C4DH67 115 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 MYO1CO00159 1063 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 FFAR3O14843 346 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 GPR42O15529 346 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 FOXS1O43638 330 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 FTCDO95954 541 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 CYC1P08574 325 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 COX6B1P14854 86 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 EZRP15311 586 aaKnown RBP17.71■□□□□ 0.43
NME3-204ENST00000563498 AGAP20933 346 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 RPA3P35244 121 aaPredicted RBP17.71■□□□□ 0.43
NME3-204ENST00000563498 CASP6P55212 293 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 EIF3BP55884 814 aaKnown RBP17.71■□□□□ 0.43
NME3-204ENST00000563498 FAM53BQ14153 422 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 LONRF1Q17RB8 773 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 HKDC1Q2TB90 917 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 CTSL3PQ5NE16 218 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 FAAH2Q6GMR7 532 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 ZNF425Q6IV72 752 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 LRRC8BQ6P9F7 803 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 ZC3H7AQ8IWR0 971 aaKnown RBP17.71■□□□□ 0.43
NME3-204ENST00000563498 ACRBPQ8NEB7 543 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 RERGQ96A58 199 aaPredicted RBP17.71■□□□□ 0.43
NME3-204ENST00000563498 DRC3Q9H069 523 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 SYNPO2LQ9H987 977 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 EIF2B3Q9NR50 452 aaKnown RBP17.71■□□□□ 0.43
NME3-204ENST00000563498 STMN3Q9NZ72 180 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 PAK5Q9P286 719 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 ZNF148Q9UQR1 794 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 PCDHGB6Q9Y5F9 930 aa17.71■□□□□ 0.43
NME3-204ENST00000563498 H3BMM5 538 aa17.7■□□□□ 0.42
NME3-204ENST00000563498 CCNDBP1O95273 360 aa17.7■□□□□ 0.42
NME3-204ENST00000563498 HSD17B2P37059 387 aa17.7■□□□□ 0.42
NME3-204ENST00000563498 ADARP55265 1226 aaKnown RBP17.7■□□□□ 0.42
NME3-204ENST00000563498 PRDX1Q06830 199 aaKnown RBP17.7■□□□□ 0.42
NME3-204ENST00000563498 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.7■□□□□ 0.42
NME3-204ENST00000563498 RNF187Q5TA31 235 aaPredicted RBP17.7■□□□□ 0.42
NME3-204ENST00000563498 KIAA1328Q86T90 577 aa17.7■□□□□ 0.42
NME3-204ENST00000563498 IL22Q9GZX6 179 aa17.7■□□□□ 0.42
NME3-204ENST00000563498 FAM114A2Q9NRY5 505 aa17.7■□□□□ 0.42
NME3-204ENST00000563498 MKL2Q9ULH7 1088 aa17.7■□□□□ 0.42
NME3-204ENST00000563498 A0A0U1RQJ8 604 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 ZNF839A8K0R7 811 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 ARHGEF33A8MVX0 844 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 AP3B1O00203 1094 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 SLC19A2O60779 497 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 PSIP1O75475 530 aaKnown RBP17.69■□□□□ 0.42
NME3-204ENST00000563498 ESR1P03372 595 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 C8orf89P0DMQ9 161 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 ETS1P14921 441 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 SESN2P58004 480 aaPredicted RBP17.69■□□□□ 0.42
NME3-204ENST00000563498 ZNF33BQ06732 778 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 TYSND1Q2T9J0 566 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 ICE2Q659A1 982 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 MRNIPQ6NTE8 343 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 SUSD1Q6UWL2 747 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 NEK10Q6ZWH5 1172 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 TXLNBQ8N3L3 684 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 CCDC89Q8N998 374 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 METTL21AQ8WXB1 218 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 LPGAT1Q92604 370 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 TCF12Q99081 682 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 TRIM8Q9BZR9 551 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 POLQO75417 2590 aa17.69■□□□□ 0.42
NME3-204ENST00000563498 F8P00451 2351 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 A0A0A6YYC8 382 aaPredicted RBP17.68■□□□□ 0.42
NME3-204ENST00000563498 I3L1I5 382 aaPredicted RBP17.68■□□□□ 0.42
NME3-204ENST00000563498 PFDN6O15212 129 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 ARNTP27540 789 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 NMBRP28336 390 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 NPY2RP49146 381 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 EFNA3P52797 238 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 CRADDP78560 199 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 ABATP80404 500 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 KIF5AQ12840 1032 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 NDUFA9Q16795 377 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 ZNF766Q5HY98 468 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 PLAG1Q6DJT9 500 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 SDCCAG8Q86SQ7 713 aaPredicted RBP17.68■□□□□ 0.42
NME3-204ENST00000563498 PRUNE1Q86TP1 453 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 THAP3Q8WTV1 239 aaPredicted RBP17.68■□□□□ 0.42
NME3-204ENST00000563498 BFARQ9NZS9 450 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 TAC3Q9UHF0 121 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 PCYOX1Q9UHG3 505 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 SH3BGRL2Q9UJC5 107 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 ADGRG4Q8IZF6 3080 aa17.68■□□□□ 0.42
NME3-204ENST00000563498 H0YIG0 161 aa17.67■□□□□ 0.42
NME3-204ENST00000563498 NIPSNAP2O75323 286 aa17.67■□□□□ 0.42
NME3-204ENST00000563498 CATP04040 527 aaKnown RBP17.67■□□□□ 0.42
NME3-204ENST00000563498 FMO4P31512 558 aa17.67■□□□□ 0.42
NME3-204ENST00000563498 AVPR1BP47901 424 aa17.67■□□□□ 0.42
NME3-204ENST00000563498 SMSP52788 366 aa17.67■□□□□ 0.42
NME3-204ENST00000563498 PNLIPRP1P54315 467 aa17.67■□□□□ 0.42
NME3-204ENST00000563498 ADORA2A-AS1P86434 159 aa17.67■□□□□ 0.42
NME3-204ENST00000563498 SYT16Q17RD7 645 aa17.67■□□□□ 0.42
NME3-204ENST00000563498 SEL1L2Q5TEA6 688 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms