RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 RBMXL3Q8N7X1 1067 aaKnown RBP13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 TTC29Q8NA56 475 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 Q8NA96 180 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 PTERQ96BW5 349 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 CFAP36Q96G28 342 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 ZFYVE21Q9BQ24 234 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 SLC26A1Q9H2B4 701 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 SOX17Q9H6I2 414 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 ABCF3Q9NUQ8 709 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 FAM53CQ9NYF3 392 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 LUZP4Q9P127 313 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 COMMD10Q9Y6G5 202 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 TEX264Q9Y6I9 313 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 CPAMD8Q8IZJ3 1885 aa13.37□□□□□ -0.27
TNFAIP2-207ENST00000560562 ICE1Q9Y2F5 2266 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 SMAPO00193 183 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 SOCS6O14544 535 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 FFAR3O14843 346 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 HAT1O14929 419 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 GPR42O15529 346 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 ATP8B1O43520 1251 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 VPS26AO75436 327 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 SORBS2O94875 1100 aaKnown RBP13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 TTC4O95801 387 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 VSNL1P62760 191 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 SRSF1Q07955 248 aaKnown RBP eCLIP13.36□□□□□ -0.279e-6■■■□□ 18.5
TNFAIP2-207ENST00000560562 PHKG1Q16816 387 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 GLE1Q53GS7 698 aaKnown RBP13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 PRR30Q53SZ7 412 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 TEDDM1Q5T9Z0 273 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 YOD1Q5VVQ6 348 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 STEAP4Q687X5 459 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 PCGF5Q86SE9 256 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 OR2A5Q96R48 311 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 SMAD5Q99717 465 aaKnown RBP13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 TRIM31Q9BZY9 425 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 WDR54Q9H977 334 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 GPR83Q9NYM4 423 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 TRMT6Q9UJA5 497 aaKnown RBP13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 IKZF3Q9UKT9 509 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 PDE10AQ9Y233 779 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 RUVBL1Q9Y265 456 aaKnown RBP13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 PSAT1Q9Y617 370 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 HS3ST3B1Q9Y662 390 aa13.36□□□□□ -0.27
TNFAIP2-207ENST00000560562 VSTM2BA6NLU5 285 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 CYSRT1A8MQ03 144 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 RRP9O43818 475 aaKnown RBP13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 ALBP02768 609 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 STATHP02808 62 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 RPL21P46778 160 aaKnown RBP13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 RRADP55042 308 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 TBPL1P62380 186 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 SYDE1Q6ZW31 735 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 ANKMY2Q8IV38 441 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 RUNDC3BQ96NL0 473 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 OLFM1Q99784 485 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 MFRPQ9BY79 579 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 ZBTB20Q9HC78 741 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 ANKMY1Q9P2S6 941 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 FBXL4Q9UKA2 621 aa13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 MRPS2Q9Y399 296 aaKnown RBP13.35□□□□□ -0.27
TNFAIP2-207ENST00000560562 EIF3FO00303 357 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 ZBTB14O43829 449 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 MMP11P24347 488 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 TNFRSF8P28908 595 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 HSD17B2P37059 387 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 EFNA3P52797 238 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 HIF1AQ16665 826 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 FAM214AQ32MH5 1076 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 BEND6Q5SZJ8 279 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 SLC6A19Q695T7 634 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 JMJD6Q6NYC1 403 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 KIRREL2Q6UWL6 708 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 TMEM207Q6UWW9 146 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 KIAA0408Q6ZU52 694 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 GALNT7Q86SF2 657 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 ZGRF1Q86YA3 2104 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 PRSS58Q8IYP2 241 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 PDIK1LQ8N165 341 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 GALNT16Q8N428 558 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 CSNK1A1LQ8N752 337 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 AMER3Q8N944 861 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 LINGO1Q96FE5 620 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 IP6K3Q96PC2 410 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 KRT12Q99456 494 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 NAT9Q9BTE0 207 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 LRRC1Q9BTT6 524 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 ZNF552Q9H707 407 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 ZNF304Q9HCX3 659 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 TAS2R13Q9NYV9 303 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 ZNF451Q9Y4E5 1061 aa13.34□□□□□ -0.27
TNFAIP2-207ENST00000560562 CLEC18AA5D8T8 446 aa13.33□□□□□ -0.28
TNFAIP2-207ENST00000560562 E7ESA3 106 aa13.33□□□□□ -0.28
TNFAIP2-207ENST00000560562 H7BY64 318 aa13.33□□□□□ -0.28
TNFAIP2-207ENST00000560562 AGPSO00116 658 aa13.33□□□□□ -0.28
TNFAIP2-207ENST00000560562 FOXS1O43638 330 aa13.33□□□□□ -0.28
TNFAIP2-207ENST00000560562 PIAS1O75925 651 aa13.33□□□□□ -0.28
TNFAIP2-207ENST00000560562 CD63P08962 238 aa13.33□□□□□ -0.28
TNFAIP2-207ENST00000560562 EZRP15311 586 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms