RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 E7ENQ6 273 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 NPIPB8E9PQR5 432 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 H0Y8X5 98 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 M0QZK8 103 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF213O14771 459 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 GPAA1O43292 621 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CST8O60676 142 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRCH4O75427 683 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 GLCEO94923 617 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR2C1O95371 312 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CFIP05156 583 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 UGT2B4P06133 528 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PGK2P07205 417 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CD3GP09693 182 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 SBK2P0C263 348 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR2T7P0C7T2 308 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZDHHC11BP0C7U3 371 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 COX5BP10606 129 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PEPDP12955 493 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PLS3P13797 630 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 GSPT1P15170 499 aaKnown RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CD19P15391 556 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 NQO2P16083 231 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 DDCP20711 480 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 AGAP20933 346 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 DGKAP23743 735 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 DTYMKP23919 212 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CYP2F1P24903 491 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 HSD11B1P28845 292 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 LCN1P31025 176 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCR4P51679 360 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 RIDAP52758 137 aaKnown RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 C21orf59P57076 290 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 KRTAP10-2P60368 255 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 RAB11AP62491 216 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 VSNL1P62760 191 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 IL9RQ01113 521 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 NAE1Q13564 534 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 SNW1Q13573 536 aaKnown RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ENPP2Q13822 863 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC17A1Q14916 467 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 RTP5Q14D33 572 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 RAB11BQ15907 218 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 MAN2A1Q16706 1144 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CA9Q16790 459 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC5A12Q1EHB4 618 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 BMT2Q1RMZ1 405 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 TRIM16LQ309B1 348 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CERKLQ49MI3 558 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ATP13A5Q4VNC0 1218 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 KHDC1Q4VXA5 237 aaKnown RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 IFI44LQ53G44 452 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 TAF1BQ53T94 588 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 BEX5Q5H9J7 111 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 KHDC1LQ5JSQ8 128 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 TTC38Q5R3I4 469 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 C9orf50Q5SZB4 431 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRAMEF5Q5TYX0 476 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRAMEF9Q5VWM5 478 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRAMEF6Q5VXH4 476 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 RAET1LQ5VY80 246 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 FAM91A1Q658Y4 838 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF772Q68DY9 489 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 TCEAL6Q6IPX3 200 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 C11orf57Q6ZUT1 292 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PAQR9Q6ZVX9 377 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 SYT13Q7L8C5 426 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 NIPA1Q7RTP0 329 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 TAS1R1Q7RTX1 841 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF551Q7Z340 670 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 RBM45Q8IUH3 476 aaKnown RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 IGDCC3Q8IVU1 814 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ELMOD1Q8N336 334 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF786Q8N393 782 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 FBXL16Q8N461 479 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 KYQ8NBH2 561 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 NECAP1Q8NC96 275 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 TMEM35BQ8NCS4 154 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR4K14Q8NGD5 310 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR8J1Q8NGP2 316 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PNPT1Q8TCS8 783 aaKnown RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 OIT3Q8WWZ8 545 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 HAS2Q92819 552 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 RAB24Q969Q5 203 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCDC127Q96BQ5 260 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 REPS1Q96D71 796 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 MTBPQ96DY7 904 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 TCEAL4Q96EI5 215 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 FAM84BQ96KN1 310 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CTRCQ99895 268 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CITED1Q99966 193 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 VRK1Q99986 396 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ALKBH7Q9BT30 221 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 HTATIP2Q9BUP3 242 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 MRPL13Q9BYD1 178 aaKnown RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 DPH1Q9BZG8 443 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZYG11BQ9C0D3 744 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 YIPF3Q9GZM5 350 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRDM14Q9GZV8 571 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLITRK2Q9H156 845 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms