RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ZNF767PQ75MW2 155 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC44A1Q8WWI5 657 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 SCRN2Q96FV2 425 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC7A8Q9UHI5 535 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ACSL5Q9ULC5 683 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 RFPL1O75677 317 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 H2AFB2P0C5Z0 115 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 PPIGQ13427 754 aaKnown RBP eCLIP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMEM214Q6NUQ4 689 aaKnown RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 NIPAL3Q6P499 406 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ADAM2Q99965 735 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 PRDM12Q9H4Q4 367 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 COPZ2Q9P299 210 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 MFSD11O43934 449 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 RBBP9O75884 186 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 IDH3AP50213 366 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF41P51814 821 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 HSD11B2P80365 405 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 SH3PXD2AQ5TCZ1 1133 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 CCDC71Q8IV32 467 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 AGBL3Q8NEM8 1001 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR2M4Q96R27 311 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF705GA8MUZ8 300 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 H1F0P07305 194 aaKnown RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 CTSOP43234 321 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 VEGFCP49767 419 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 MFSD13AQ14CX5 517 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 NAT16Q8N8M0 369 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF701Q9NV72 531 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 CDC14AQ9UNH5 594 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 CASC3O15234 703 aaKnown RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 RFX5P48382 616 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 PLP2Q04941 152 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC39A4Q6P5W5 647 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 COMMD7Q86VX2 200 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ARMC5Q96C12 935 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 FEM1CQ96JP0 617 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC35A5Q9BS91 424 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 DNTTIP1Q9H147 329 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 TPT1P8Q9HAU6 139 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 MAN2C1Q9NTJ4 1040 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 TDP1Q9NUW8 608 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF254O75437 659 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 TRAPPC6AO75865 159 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 PAK4O96013 591 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 LPLP06858 475 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 WNT3AP56704 352 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 DCLRE1AQ6PJP8 1040 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 PLA2G15Q8NCC3 412 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 PTPN18Q99952 460 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZFP57Q9NU63 452 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ASB6Q9NWX5 421 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ERVW-1Q9UQF0 538 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 EXOSC1Q9Y3B2 195 aaKnown RBP13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 UGGT1Q9NYU2 1555 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 LGR5O75473 907 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 CTDNEP1O95476 244 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 AKR1A1P14550 325 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 CRHR2Q13324 411 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 FAM174BQ3ZCQ3 159 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 ERN2Q76MJ5 926 aaKnown RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 RASGRP3Q8IV61 690 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR4K17Q8NGC6 315 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR4K2Q8NGD2 314 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 ITFG2Q969R8 447 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 EIF2B4Q9UI10 523 aaKnown RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 A0A0G2JLW4 131 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 F8W036 122 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 ANGPTL7O43827 346 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 PRKXP51817 358 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 BLOC1S1P78537 153 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 FOXM1Q08050 763 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 CDNFQ49AH0 187 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 LILRB2Q8N423 598 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMEM109Q9BVC6 243 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 RTFDC1Q9BY42 306 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 NMUR2Q9GZQ4 415 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 A0A0U1RQK1 487 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 ACTL6BO94805 426 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 TAS2R39P59534 338 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 DPY19L3Q6ZPD9 716 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 NCCRP1Q6ZVX7 275 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 DENND1AQ8TEH3 1009 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 LRRC3Q9BY71 257 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 ALOX15BO15296 676 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 FLRT2O43155 660 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 MT-ND2P03891 347 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 JUNP05412 331 aaKnown RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 SOX10P56693 466 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 DAG1Q14118 895 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 DHCR24Q15392 516 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 UNQ6126/PRO20091Q6UXV3 157 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 CMC1Q7Z7K0 106 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 SHC3Q92529 594 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 ARL11Q969Q4 196 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 MYRFLQ96LU7 910 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 WDR77Q9BQA1 342 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 C17orf62Q9BQA9 187 aa13.5□□□□□ -0.25
CSPG4P12-202ENST00000559989 BCAS3Q9H6U6 928 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms