RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 FAM170BA6NMN3 283 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 OR52A4PA6NMU1 304 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 NME4O00746 187 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 PRMT3O60678 531 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 ETHE1O95571 254 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 MTHFD1P11586 935 aaKnown RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 PCNAP12004 261 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 CDH1P12830 882 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 HSD17B1P14061 328 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 TACR1P25103 407 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 PKLRP30613 574 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 RAB28P51157 221 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SRP54P61011 504 aaKnown RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 AP2B1P63010 937 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SLC34A1Q06495 639 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 DDX39BQ13838 428 aaKnown RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 FLOT2Q14254 428 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 UBXN2BQ14CS0 331 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 FAM174BQ3ZCQ3 159 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 ADNP2Q6IQ32 1131 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SLC2A7Q6PXP3 512 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 C17orf64Q86WR6 236 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 KRT78Q8N1N4 520 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 OR4K1Q8NGD4 311 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 OR2L8Q8NGY9 312 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SLC13A3Q8WWT9 602 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 TSACCQ96A04 125 aaPredicted RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 TESCQ96BS2 214 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 BIRC7Q96CA5 298 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SPNS1Q9H2V7 528 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 CHRDQ9H2X0 955 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 NMRK1Q9NWW6 199 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 TRNAU1APQ9NX07 287 aaKnown RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 CMTM6Q9NX76 183 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SLAMF8Q9P0V8 285 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SCHIP1Q9P0W5 487 aaPredicted RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 STOML1Q9UBI4 398 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 TBC1D29Q9UFV1 150 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 TAC3Q9UHF0 121 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 DGKBQ9Y6T7 804 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 DOCK9Q9BZ29 2069 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 PGRP06401 933 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 MSX2P35548 267 aaPredicted RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 C21orf58P58505 322 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 RPS13P62277 151 aaKnown RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 ZP2Q05996 745 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 ACSM2AQ08AH3 577 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 PWP1Q13610 501 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 CAPRIN1Q14444 709 aaKnown RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 KRT33BQ14525 404 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 ALG11Q2TAA5 492 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SPIN4Q56A73 249 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SPANXN4Q5MJ08 99 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 ACSM2BQ68CK6 577 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 GALNT18Q6P9A2 607 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 TMIGD1Q6UXZ0 262 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 HID1Q8IV36 788 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 KIAA2013Q8IYS2 634 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 FAM156AQ8NDB6 213 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 OR52E1Q8NGJ3 308 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SLC26A7Q8TE54 656 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 GTF2H4Q92759 462 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 TMEM125Q96AQ2 219 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 SH3KBP1Q96B97 665 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 TSSK3Q96PN8 268 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 ACAT2Q9BWD1 397 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 GPR174Q9BXC1 333 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 PITHD1Q9GZP4 211 aaPredicted RBP12.22□□□□□ -0.45
USP3-213ENST00000559711 KIR3DX1Q9H7L2 352 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 NT5DC2Q9H857 520 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 DMRT3Q9NQL9 472 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 GPR27Q9NS67 375 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 ADGRE2Q9UHX3 823 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 COLEC10Q9Y6Z7 277 aa12.22□□□□□ -0.45
USP3-213ENST00000559711 C15orf38-AP3S2A0A0A6YYH1 394 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 IGHV1OR15-9A0A0B4J2B8 117 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 A6NCN8 305 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 SCAMP1O15126 338 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 MYO1DO94832 1006 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 ANPEPP15144 967 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 TCN1P20061 433 aaPredicted RBP12.21□□□□□ -0.45
USP3-213ENST00000559711 PRPS1L1P21108 318 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 CXCR2P25025 360 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 AK4P27144 223 aaPredicted RBP12.21□□□□□ -0.45
USP3-213ENST00000559711 NDUFS1P28331 727 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 ERFP50548 548 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 CCR8P51685 355 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 YBX1P67809 324 aaKnown RBP12.21□□□□□ -0.45
USP3-213ENST00000559711 RAE1P78406 368 aaKnown RBP12.21□□□□□ -0.45
USP3-213ENST00000559711 NANOGP8Q6NSW7 305 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 RD3Q7Z3Z2 195 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 ARPINQ7Z6K5 226 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 DHDDSQ86SQ9 333 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP3-213ENST00000559711 DEFB123Q8N688 67 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 ZNF740Q8NDX6 193 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 OR13H1Q8NG92 308 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 CLHC1Q8NHS4 586 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 DNAJB14Q8TBM8 379 aa12.21□□□□□ -0.45
USP3-213ENST00000559711 EGLN2Q96KS0 407 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms