RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SOX13Q9UN79 622 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 CRYL1Q9Y2S2 319 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 MRPS2Q9Y399 296 aaKnown RBP15.15■□□□□ 0.02
SCFD1-224ENST00000557713 CSMD1Q96PZ7 3565 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 PFDN6O15212 129 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 WFS1O76024 890 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 HEXBP07686 556 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 CELA2AP08217 269 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 HSD17B2P37059 387 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 EFNA3P52797 238 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 PNLIPRP1P54315 467 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 KCNK10P57789 538 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 PCOLCEQ15113 449 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 RPS6KA1Q15418 735 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 ICE2Q659A1 982 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 FAAH2Q6GMR7 532 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 RIPOR1Q6ZS17 1223 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 CENPUQ71F23 418 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 AMER2Q8N7J2 671 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 IMMP1LQ96LU5 166 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 MAGEB10Q96LZ2 347 aaPredicted RBP15.14■□□□□ 0.01
SCFD1-224ENST00000557713 ZNF700Q9H0M5 742 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 FAM114A2Q9NRY5 505 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 RIC8BQ9NVN3 520 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 TAC3Q9UHF0 121 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 ABCA12Q86UK0 2595 aa15.14■□□□□ 0.01
SCFD1-224ENST00000557713 A0A0A6YYC8 382 aaPredicted RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 TCRBV7S3A2A0A539 114 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 ARHGAP10A1A4S6 786 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 E7ENX8 843 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 I3L1I5 382 aaPredicted RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 WDPCPO95876 746 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 F10P00742 488 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 ITGAMP11215 1152 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 PKMP14618 531 aaKnown RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 EZRP15311 586 aaKnown RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 TPSB2P20231 275 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 OGNP20774 298 aaKnown RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 CLCN7P51798 805 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 CDK16Q00536 496 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 TAP2Q03519 686 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 KCNJ11Q14654 390 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 TPSAB1Q15661 275 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 SYT16Q17RD7 645 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 KIAA0930Q6ICG6 404 aaPredicted RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 ZC3H7AQ8IWR0 971 aaKnown RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 LRRC56Q8IYG6 542 aaPredicted RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 FBXO15Q8NCQ5 510 aaPredicted RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 PPFIBP2Q8ND30 876 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 ZNF480Q8WV37 535 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 SLC30A3Q99726 388 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 UNKQ9C0B0 810 aaKnown RBP15.13■□□□□ 0.01
SCFD1-224ENST00000557713 RNF32Q9H0A6 362 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 COPG2Q9UBF2 871 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 ZKSCAN5Q9Y2L8 839 aa15.13■□□□□ 0.01
SCFD1-224ENST00000557713 ZNF839A8K0R7 811 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 PRSS44E7EML9 344 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 TXNDC9O14530 226 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 CCNDBP1O95273 360 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 SLC16A8O95907 504 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 CATP04040 527 aaKnown RBP15.12■□□□□ 0.01
SCFD1-224ENST00000557713 ANXA5P08758 320 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 ICAM2P13598 275 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 KCNJ1P48048 391 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 SNRPNP63162 240 aaKnown RBP15.12■□□□□ 0.01
SCFD1-224ENST00000557713 ABATP80404 500 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 TSTA3Q13630 321 aaPredicted RBP15.12■□□□□ 0.01
SCFD1-224ENST00000557713 FAM53BQ14153 422 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 KCTD19Q17RG1 926 aaPredicted RBP15.12■□□□□ 0.01
SCFD1-224ENST00000557713 NEK10Q6ZWH5 1172 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 GSTA5Q7RTV2 222 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 CILP2Q8IUL8 1156 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 REXO1L1PQ8IX06 675 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 DNAJB8Q8NHS0 232 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 RERGQ96A58 199 aaPredicted RBP15.12■□□□□ 0.01
SCFD1-224ENST00000557713 TSGA10Q9BZW7 698 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 DRC3Q9H069 523 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCFD1-224ENST00000557713 UTP6Q9NYH9 597 aaKnown RBP15.12■□□□□ 0.01
SCFD1-224ENST00000557713 ABI3Q9P2A4 366 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 PCYOX1Q9UHG3 505 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 MKL2Q9ULH7 1088 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 CNTRLQ7Z7A1 2325 aa15.12■□□□□ 0.01
SCFD1-224ENST00000557713 E5RI56 91 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 HAT1O14929 419 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 P2RX6O15547 441 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 AVILO75366 819 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 MST1P26927 711 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 MAT1AQ00266 395 aaKnown RBP15.11■□□□□ 0.01
SCFD1-224ENST00000557713 ART3Q13508 389 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 ARMC3Q5W041 872 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 HIBCHQ6NVY1 386 aaPredicted RBP15.11■□□□□ 0.01
SCFD1-224ENST00000557713 NEPROQ6NW34 567 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 GFRALQ6UXV0 394 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 CYHR1Q6ZMK1 362 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 SPNS2Q8IVW8 549 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 ASB11Q8WXH4 323 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 TUBB6Q9BUF5 446 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 INTS10Q9NVR2 710 aaKnown RBP15.11■□□□□ 0.01
SCFD1-224ENST00000557713 STMN3Q9NZ72 180 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms