RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CSAG2Q9Y5P2 127 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 CENPEQ02224 2701 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 E7ENX8 843 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 EIF3FO00303 357 aaPredicted RBP13.49□□□□□ -0.25
SNX6-210ENST00000557341 TXNDC9O14530 226 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 ZBTB14O43829 449 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 GLRBP48167 497 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 ABATP80404 500 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 MPP1Q00013 466 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 TAP2Q03519 686 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 ELOAQ14241 798 aaKnown RBP13.49□□□□□ -0.25
SNX6-210ENST00000557341 HIF1AQ16665 826 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 HKDC1Q2TB90 917 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 THEMIS2Q5TEJ8 643 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 GARNL3Q5VVW2 1013 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 LRRC8EQ6NSJ5 796 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 PARP9Q8IXQ6 854 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 PPIL6Q8IXY8 311 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 CPNE9Q8IYJ1 553 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 AGGF1Q8N302 714 aaeCLIP13.49□□□□□ -0.25
SNX6-210ENST00000557341 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNX6-210ENST00000557341 GABPB2Q8TAK5 448 aaPredicted RBP13.49□□□□□ -0.25
SNX6-210ENST00000557341 ASB11Q8WXH4 323 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 THOC3Q96J01 351 aaKnown RBP13.49□□□□□ -0.25
SNX6-210ENST00000557341 OR2A5Q96R48 311 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 EBNA1BP2Q99848 306 aaKnown RBP13.49□□□□□ -0.25
SNX6-210ENST00000557341 DRC3Q9H069 523 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 SYNPO2LQ9H987 977 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 ZNF160Q9HCG1 818 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 AGPAT4Q9NRZ5 378 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 ABCF3Q9NUQ8 709 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 STOX2Q9P2F5 926 aaPredicted RBP13.49□□□□□ -0.25
SNX6-210ENST00000557341 TRPC4Q9UBN4 977 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 PLEKHB1Q9UF11 243 aaPredicted RBP13.49□□□□□ -0.25
SNX6-210ENST00000557341 FBXO5Q9UKT4 447 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 DHRS7Q9Y394 339 aa13.49□□□□□ -0.25
SNX6-210ENST00000557341 COPG1Q9Y678 874 aaKnown RBP13.49□□□□□ -0.25
SNX6-210ENST00000557341 IDSB3KWA1 339 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 GFYI3L273 518 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 HAT1O14929 419 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 DDAH2O95865 285 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 ANXA5P08758 320 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 IMPA1P29218 277 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 SKIV2L2P42285 1042 aaKnown RBP13.48□□□□□ -0.25
SNX6-210ENST00000557341 RELAQ04206 551 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 PTK6Q13882 451 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 PPP1R7Q15435 360 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 HSP90AA5PQ58FG0 334 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 VWA2Q5GFL6 755 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 CRB2Q5IJ48 1285 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 ISLR2Q6UXK2 745 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 UBE2R2Q712K3 238 aaPredicted RBP13.48□□□□□ -0.25
SNX6-210ENST00000557341 PIWIL4Q7Z3Z4 852 aaKnown RBP13.48□□□□□ -0.25
SNX6-210ENST00000557341 KCNMB4Q86W47 210 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 ACTRT1Q8TDG2 376 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 C8orf44Q96CB5 159 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 MMABQ96EY8 250 aaPredicted RBP13.48□□□□□ -0.25
SNX6-210ENST00000557341 CNDP1Q96KN2 507 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 SIGLEC10Q96LC7 697 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 OSBPL9Q96SU4 736 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 AARSD1Q9BTE6 412 aaKnown RBP13.48□□□□□ -0.25
SNX6-210ENST00000557341 YIPF2Q9BWQ6 316 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 MKKSQ9NPJ1 570 aaPredicted RBP13.48□□□□□ -0.25
SNX6-210ENST00000557341 CCDC177Q9NQR7 707 aaPredicted RBP13.48□□□□□ -0.25
SNX6-210ENST00000557341 NTNG1Q9Y2I2 539 aa13.48□□□□□ -0.25
SNX6-210ENST00000557341 DIDO1Q9BTC0 2240 aaKnown RBP13.47□□□□□ -0.25
SNX6-210ENST00000557341 NSG1A0A0A6YYJ2 146 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 ANKUB1A6NFN9 424 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 FFAR3O14843 346 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 PCDH17O14917 1159 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 GPR42O15529 346 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 CBX6O95503 412 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 RNF224P0DH78 156 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 COX6A1P12074 109 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 PGAM1P18669 254 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 FDXRP22570 491 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 CXCR2P25025 360 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 SLC26A3P40879 764 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 TSFMP43897 325 aaKnown RBP13.47□□□□□ -0.25
SNX6-210ENST00000557341 TBPL1P62380 186 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 Q0VFX4 171 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 MFAP5Q13361 173 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 CRYMQ14894 314 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 ZNF169Q14929 603 aaPredicted RBP13.47□□□□□ -0.25
SNX6-210ENST00000557341 RNASEH2BQ5TBB1 312 aaKnown RBP13.47□□□□□ -0.25
SNX6-210ENST00000557341 ATG9BQ674R7 924 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 B3GNTL1Q67FW5 361 aaPredicted RBP13.47□□□□□ -0.25
SNX6-210ENST00000557341 UGT3A1Q6NUS8 523 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 LRRC56Q8IYG6 542 aaPredicted RBP13.47□□□□□ -0.25
SNX6-210ENST00000557341 SLC35F6Q8N357 371 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 AMER3Q8N944 861 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 DNAJB14Q8TBM8 379 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 BARD1Q99728 777 aaKnown RBP13.47□□□□□ -0.25
SNX6-210ENST00000557341 MESP1Q9BRJ9 268 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 IARS2Q9NSE4 1012 aaKnown RBP13.47□□□□□ -0.25
SNX6-210ENST00000557341 ASIC3Q9UHC3 531 aa13.47□□□□□ -0.25
SNX6-210ENST00000557341 TRMT6Q9UJA5 497 aaKnown RBP13.47□□□□□ -0.25
SNX6-210ENST00000557341 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
SNX6-210ENST00000557341 A0A1W2PQ72 361 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms