RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ABATP80404 500 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 TAP2Q03519 686 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 CYP1B1Q16678 543 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 LONRF1Q17RB8 773 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 HKDC1Q2TB90 917 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 ATG9BQ674R7 924 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 ADCK2Q7Z695 626 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 RERGQ96A58 199 aaPredicted RBP21.51■■□□□ 1.03
ACTN1-220ENST00000556433 MVB12AQ96EY5 273 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 CNDP1Q96KN2 507 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 OR2A5Q96R48 311 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 NAP1L3Q99457 506 aaPredicted RBP21.51■■□□□ 1.03
ACTN1-220ENST00000556433 GPR21Q99679 349 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 BARD1Q99728 777 aaKnown RBP21.51■■□□□ 1.03
ACTN1-220ENST00000556433 A1L4Q6 167 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 GFYI3L273 518 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 FFAR3O14843 346 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 GPR42O15529 346 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 DSG2Q14126 1118 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 THEMIS2Q5TEJ8 643 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 GARNL3Q5VVW2 1013 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 ISLR2Q6UXK2 745 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 LINC00696Q6ZRV3 163 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 LMNTD2Q8IXW0 634 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 AGGF1Q8N302 714 aaeCLIP21.5■■□□□ 1.03
ACTN1-220ENST00000556433 CALML6Q8TD86 181 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 COG1Q8WTW3 980 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 MMABQ96EY8 250 aaPredicted RBP21.5■■□□□ 1.03
ACTN1-220ENST00000556433 SIGLEC10Q96LC7 697 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 LMF1Q96S06 567 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 PCYOX1Q9UHG3 505 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 ERRFI1Q9UJM3 462 aaPredicted RBP21.5■■□□□ 1.03
ACTN1-220ENST00000556433 FBXO5Q9UKT4 447 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 COMMD10Q9Y6G5 202 aa21.5■■□□□ 1.03
ACTN1-220ENST00000556433 TXNDC9O14530 226 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 KLHL18O94889 574 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 HAUS5O94927 633 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 ANXA5P08758 320 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 EZRP15311 586 aaKnown RBP21.49■■□□□ 1.03
ACTN1-220ENST00000556433 CXCR2P25025 360 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 RELAQ04206 551 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 ZNF169Q14929 603 aaPredicted RBP21.49■■□□□ 1.03
ACTN1-220ENST00000556433 NDUFAF7Q7L592 441 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 KBTBD2Q8IY47 623 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 CPNE9Q8IYJ1 553 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 NAT8LQ8N9F0 302 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 NUP210LQ5VU65 1888 aa21.49■■□□□ 1.03
ACTN1-220ENST00000556433 NSG1A0A0A6YYJ2 146 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 IDSB3KWA1 339 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 PGRMC1O00264 195 aaKnown RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 SLC26A3P40879 764 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 SKIV2L2P42285 1042 aaKnown RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 MAGEA3P43357 314 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 TSFMP43897 325 aaKnown RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 MPP1Q00013 466 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 CDC16Q13042 620 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 MFAP5Q13361 173 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 TLR1Q15399 786 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 HSP90AA5PQ58FG0 334 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 UBE2R2Q712K3 238 aaPredicted RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 PIWIL4Q7Z3Z4 852 aaKnown RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 KCNMB4Q86W47 210 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 PLD3Q8IV08 490 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 LRRC56Q8IYG6 542 aaPredicted RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 CD200R1Q8TD46 325 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 EBNA1BP2Q99848 306 aaKnown RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 AARSD1Q9BTE6 412 aaKnown RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 IARS2Q9NSE4 1012 aaKnown RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 C14orf105Q9NVL8 296 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 SLC5A6Q9Y289 635 aa21.48■■□□□ 1.03
ACTN1-220ENST00000556433 UTP20O75691 2785 aaKnown RBP21.48■■□□□ 1.03
ACTN1-220ENST00000556433 A0A0A6YYC8 382 aaPredicted RBP21.47■■□□□ 1.03
ACTN1-220ENST00000556433 WIPF3A6NGB9 483 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 H7BY64 318 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 I3L1I5 382 aaPredicted RBP21.47■■□□□ 1.03
ACTN1-220ENST00000556433 HAT1O14929 419 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 FOXS1O43638 330 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 HEXBP07686 556 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 COX6A1P12074 109 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 FAAH2Q6GMR7 532 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 PPIL6Q8IXY8 311 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 AMER3Q8N944 861 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.47■■□□□ 1.03
ACTN1-220ENST00000556433 CATSPER1Q8NEC5 780 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 GRHL3Q8TE85 626 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 GRK7Q8WTQ7 553 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 PRAP1Q96NZ9 151 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 FAM167BQ9BTA0 163 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 DRC3Q9H069 523 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 MKKSQ9NPJ1 570 aaPredicted RBP21.47■■□□□ 1.03
ACTN1-220ENST00000556433 HEATR5BQ9P2D3 2071 aa21.47■■□□□ 1.03
ACTN1-220ENST00000556433 P2RX6O15547 441 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 LDLRP01130 860 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 IMPA1P29218 277 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 EEF1A2Q05639 463 aaKnown RBP21.46■■□□□ 1.03
ACTN1-220ENST00000556433 NDUFA9Q16795 377 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 SYT16Q17RD7 645 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 B3GNTL1Q67FW5 361 aaPredicted RBP21.46■■□□□ 1.03
ACTN1-220ENST00000556433 ARHGEF39Q8N4T4 335 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 ST6GALNAC3Q8NDV1 305 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms