RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 BRCA2P51587 3418 aa14.41□□□□□ -0.1
CUX1-215ENST00000556210 FXYD1O00168 92 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 LSM1O15116 133 aaKnown RBP14.4□□□□□ -0.1
CUX1-215ENST00000556210 ABCB7O75027 752 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 SERPINI2O75830 405 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 CYP7B1O75881 506 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 DGKGP49619 791 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 ATP4BP51164 291 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 EMP3P54852 163 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 VBP1P61758 197 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 NPTX1Q15818 432 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 TMEM53Q6P2H8 277 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 GET4Q7L5D6 327 aaPredicted RBP14.4□□□□□ -0.1
CUX1-215ENST00000556210 TBC1D15Q8TC07 691 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 DOK4Q8TEW6 326 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 RAB8BQ92930 207 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 RELTQ969Z4 430 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 CHCHD6Q9BRQ6 235 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 HERC2P3Q9BVR0 1158 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 MUC13Q9H3R2 512 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 DUS2Q9NX74 493 aaKnown RBP14.4□□□□□ -0.1
CUX1-215ENST00000556210 VIPP01282 170 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 LAMP1P11279 417 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 CD247P20963 164 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 RRM2P31350 389 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 GRIN2CQ14957 1233 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 SBSNQ6UWP8 590 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 PIH1D2Q8WWB5 315 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 ATL1Q8WXF7 558 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 HSH2DQ96JZ2 352 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 BBS4Q96RK4 519 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 YTHDF1Q9BYJ9 559 aaKnown RBP14.4□□□□□ -0.1
CUX1-215ENST00000556210 ACPTQ9BZG2 426 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 CD300AQ9UGN4 299 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 SMIM30A4D0T7 59 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 PIM1P11309 404 aaPredicted RBP14.4□□□□□ -0.1
CUX1-215ENST00000556210 DDX5P17844 614 aaKnown RBP14.4□□□□□ -0.1
CUX1-215ENST00000556210 CLCN7P51798 805 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 DOC2AQ14183 400 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 ATP6AP1Q15904 470 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 SLC36A3Q495N2 470 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 SLC8B1Q6J4K2 584 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 AADATQ8N5Z0 425 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 MFSD2AQ8NA29 543 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 STON2Q8WXE9 905 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 SMG7Q92540 1137 aaKnown RBP14.4□□□□□ -0.1
CUX1-215ENST00000556210 PEX13Q92968 403 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 TMEM175Q9BSA9 504 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 SLC2A11Q9BYW1 496 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 LHPPQ9H008 270 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 ITM2CQ9NQX7 267 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 DEC1Q9P2X7 70 aa14.4□□□□□ -0.1
CUX1-215ENST00000556210 E7EQ34 232 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 SNPHO15079 494 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 MATN4O95460 622 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 CLCN4P51793 760 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 TRUB1Q8WWH5 349 aaKnown RBP14.39□□□□□ -0.11
CUX1-215ENST00000556210 NLNQ9BYT8 704 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 IKZF5Q9H5V7 419 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 TMA7Q9Y2S6 64 aaKnown RBP14.39□□□□□ -0.11
CUX1-215ENST00000556210 GPSM3Q9Y4H4 160 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 OARD1Q9Y530 152 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 TPD52L2O43399 206 aaKnown RBP14.39□□□□□ -0.11
CUX1-215ENST00000556210 ALOX5P09917 674 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 PRPS2P11908 318 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 PPM1AP35813 382 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 TMBIM6P55061 237 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 FPGSQ05932 587 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 AFMIDQ63HM1 303 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 GLB1L3Q8NCI6 653 aaPredicted RBP14.39□□□□□ -0.11
CUX1-215ENST00000556210 CXorf40AQ8TE69 158 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 CEP44Q9C0F1 390 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 DYTNA2CJ06 578 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 TMEM189-UBE2V1I3L0A0 370 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 ERN1O75460 977 aaKnown RBP14.39□□□□□ -0.11
CUX1-215ENST00000556210 MATN1P21941 496 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 HTR1EP28566 365 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 PDHA2P29803 388 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 OPRL1P41146 370 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 GJA8P48165 433 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 CAP1Q01518 475 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 TMEM115Q12893 351 aaPredicted RBP14.39□□□□□ -0.11
CUX1-215ENST00000556210 Q6ZPB1 254 aaPredicted RBP14.39□□□□□ -0.11
CUX1-215ENST00000556210 P2RY8Q86VZ1 359 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 SVOPQ8N4V2 548 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 CSGALNACT1Q8TDX6 532 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 PROX1Q92786 737 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 PYURFQ96I23 114 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 MARCH7Q9H992 704 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 TRIM39Q9HCM9 518 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 PCDHGA8Q9Y5G5 932 aa14.39□□□□□ -0.11
CUX1-215ENST00000556210 ARID2Q68CP9 1835 aa14.38□□□□□ -0.11
CUX1-215ENST00000556210 SLC31A1O15431 190 aa14.38□□□□□ -0.11
CUX1-215ENST00000556210 SOX14O95416 240 aa14.38□□□□□ -0.11
CUX1-215ENST00000556210 FUCA1P04066 466 aa14.38□□□□□ -0.11
CUX1-215ENST00000556210 NUDT7P0C024 238 aa14.38□□□□□ -0.11
CUX1-215ENST00000556210 BUD31P41223 144 aaPredicted RBP14.38□□□□□ -0.11
CUX1-215ENST00000556210 CTSCP53634 463 aa14.38□□□□□ -0.11
CUX1-215ENST00000556210 TAS2R50P59544 299 aa14.38□□□□□ -0.11
CUX1-215ENST00000556210 MC1RQ01726 317 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms