RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TMEM9BQ9NQ34 198 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 KCNK4Q9NYG8 393 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 IGHV1OR21-1A0A087WYE8 117 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 RHPN2P1A8MT19 583 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 ISM1B1AKI9 464 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 E9PBE3 544 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 KLHL41O60662 606 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 CBFA2T3O75081 653 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 UBXN7O94888 489 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 EBLN1P0CF75 366 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 UROSP10746 265 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 GLB1P16278 677 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 UGT2B7P16662 529 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 GNAZP19086 355 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 NDUFS1P28331 727 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 CD1CP29017 333 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 GRIA3P42263 894 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 CCL7P80098 99 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 ZRSR2Q15696 482 aaKnown RBP10.35□□□□□ -0.75
TDP1-211ENST00000555178 ZIC1Q15915 447 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 LCTLQ6UWM7 567 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 ZNF574Q6ZN55 896 aaPredicted RBP10.35□□□□□ -0.75
TDP1-211ENST00000555178 FAM92BQ6ZTR7 304 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 DGLUCYQ7Z3D6 616 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 FAM181AQ8N9Y4 354 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 RNF31Q96EP0 1072 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 NUDT22Q9BRQ3 303 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 ACTR10Q9NZ32 417 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 KLHL3Q9UH77 587 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 TRPS1Q9UHF7 1281 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 G3BP2Q9UN86 482 aaKnown RBP10.35□□□□□ -0.75
TDP1-211ENST00000555178 ARL2BPQ9Y2Y0 163 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 DYRK1BQ9Y463 629 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 KCNE2Q9Y6J6 123 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 FEZF1A0PJY2 475 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 GSAPA4D1B5 854 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 EME2A4GXA9 379 aaPredicted RBP10.35□□□□□ -0.75
TDP1-211ENST00000555178 H7BY64 318 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 NUDT21O43809 227 aaKnown RBP10.35□□□□□ -0.75
TDP1-211ENST00000555178 SH3BGRLO75368 114 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 ZNF883P0CG24 379 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 HMOX2P30519 316 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 SHMT2P34897 504 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 SLBPQ14493 270 aaKnown RBP eCLIP10.35□□□□□ -0.75
TDP1-211ENST00000555178 NR0B2Q15466 257 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 LSM12Q3MHD2 195 aaKnown RBP10.35□□□□□ -0.75
TDP1-211ENST00000555178 ICE2Q659A1 982 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 SPRED1Q7Z699 444 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 RAB42Q8N4Z0 105 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 L3MBTL4Q8NA19 623 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 HMGCLL1Q8TB92 370 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 NCSTNQ92542 709 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 SLC45A3Q96JT2 553 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 CNDP2Q96KP4 475 aaKnown RBP10.35□□□□□ -0.75
TDP1-211ENST00000555178 RILPQ96NA2 401 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 PRAP1Q96NZ9 151 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 CCDC3Q9BQI4 270 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 RAB11FIP5Q9BXF6 653 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 MEAF6Q9HAF1 191 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 GEMIN8Q9NWZ8 242 aaKnown RBP10.35□□□□□ -0.75
TDP1-211ENST00000555178 HEY2Q9UBP5 337 aa10.35□□□□□ -0.75
TDP1-211ENST00000555178 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 PIPSLA2A3N6 862 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 OR5K3A6NET4 321 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 MANBAO00462 879 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 YKT6O15498 198 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 SNUPNO95149 360 aaKnown RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 PDYNP01213 254 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 PROS1P07225 676 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 CKMT1AP12532 417 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 SLC2A4P14672 509 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 JUPP14923 745 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 CD1EP15812 388 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 HSD17B2P37059 387 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 NAA20P61599 178 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 HMGCS1Q01581 520 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 DDX39BQ13838 428 aaKnown RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 CCDC157Q569K6 752 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 STPG1Q5TH74 334 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 NXNQ6DKJ4 435 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 NXPE4Q6UWF7 544 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 MTDHQ86UE4 582 aaKnown RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 C17orf64Q86WR6 236 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 NAXDQ8IW45 347 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 OR2L3Q8NG85 312 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 BAHD1Q8TBE0 780 aaPredicted RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 IFI44Q8TCB0 444 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 MAP3K3Q99759 626 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 MACROD1Q9BQ69 325 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 DUSP23Q9BVJ7 150 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 NMUR2Q9GZQ4 415 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 OR6C2Q9NZP2 312 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 VTI1BQ9UEU0 232 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 HCN4Q9Y3Q4 1203 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 LILRA5A6NI73 299 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 LCMT2O60294 686 aaKnown RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 ENO1P06733 434 aaKnown RBP10.34□□□□□ -0.75
TDP1-211ENST00000555178 ALPPL2P10696 532 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 ST6GAL1P15907 406 aa10.34□□□□□ -0.75
TDP1-211ENST00000555178 MAGP20916 626 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms