RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 RHBDF1Q96CC6 855 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 HIST1H2AHQ96KK5 128 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 TSNARE1Q96NA8 513 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 GBP5Q96PP8 586 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 OR2A5Q96R48 311 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 HIST1H2AJQ99878 128 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ZFYVE21Q9BQ24 234 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 MACROD1Q9BQ69 325 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 H2AFJQ9BTM1 129 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 DHRS4Q9BTZ2 278 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ALG9Q9H6U8 611 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 SLC22A11Q9NSA0 550 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 IRAK4Q9NWZ3 460 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 FOXO6A8MYZ6 492 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 LCMT2O60294 686 aaKnown RBP11.81□□□□□ -0.52
SYNE2-214ENST00000554928 PRAMEF4O60810 478 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 KATNA1O75449 491 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 SLU7O95391 586 aaKnown RBP11.81□□□□□ -0.52
SYNE2-214ENST00000554928 SHBGP04278 402 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 EIF2S1P05198 315 aaKnown RBP11.81□□□□□ -0.52
SYNE2-214ENST00000554928 INHBAP08476 426 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 PRKAR1AP10644 381 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 TFEBP19484 476 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 TNFRSF8P28908 595 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 CRABP2P29373 138 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 BCL6P41182 706 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 MSH2P43246 934 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 MAGEA12P43365 314 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 SLC6A12P48065 614 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 GLRBP48167 497 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 UCNP55089 124 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 ABATP80404 500 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 CDKL1Q00532 357 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 SLC29A2Q14542 456 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 NAA30Q147X3 362 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-214ENST00000554928 HKDC1Q2TB90 917 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 ZC3H12BQ5HYM0 836 aaKnown RBP11.81□□□□□ -0.52
SYNE2-214ENST00000554928 PRAMEF9Q5VWM5 478 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 CAPN13Q6MZZ7 669 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-214ENST00000554928 RHBDD2Q6NTF9 364 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 LCTLQ6UWM7 567 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 GPR155Q7Z3F1 870 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 VN1R4Q7Z5H5 301 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 ADAMTSL2Q86TH1 951 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 GPR135Q8IZ08 494 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 ZNF740Q8NDX6 193 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 SNRNP27Q8WVK2 155 aaKnown RBP11.81□□□□□ -0.52
SYNE2-214ENST00000554928 STARD8Q92502 1023 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 ISL2Q96A47 359 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 KIAA1191Q96A73 305 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 SLC45A3Q96JT2 553 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 C10orf90Q96M02 699 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 LRFN5Q96NI6 719 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 GPR78Q96P69 363 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 BBC3Q96PG8 261 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-214ENST00000554928 ATOH8Q96SQ7 321 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 EGFL8Q99944 293 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 TRIM54Q9BYV2 358 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 SLC22A14Q9Y267 594 aa11.81□□□□□ -0.52
SYNE2-214ENST00000554928 MRPS2Q9Y399 296 aaKnown RBP11.81□□□□□ -0.52
SYNE2-214ENST00000554928 A0A096LPK6 155 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 EXOC1LA0A1B0GW35 172 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 FITM1A5D6W6 292 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 TRIM49D1C9J1S8 452 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 UBXN8O00124 270 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 CCNDBP1O95273 360 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 MT-ND3P03897 115 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ANXA5P08758 320 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 LTA4HP09960 611 aaKnown RBP11.8□□□□□ -0.52
SYNE2-214ENST00000554928 CCNYL3P0C7X3 344 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 VARSP26640 1264 aaKnown RBP11.8□□□□□ -0.52
SYNE2-214ENST00000554928 AGTR2P50052 363 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 SERPINB8P50452 374 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ATP6V0D1P61421 351 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ILF2Q12905 390 aaKnown RBP11.8□□□□□ -0.52
SYNE2-214ENST00000554928 IL10RAQ13651 578 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 PRTGQ2VWP7 1150 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 C16orf46Q6P387 395 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 TLDC1Q6P9B6 456 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 TTLL10Q6ZVT0 673 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 FRA10AC1Q70Z53 315 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 COX15Q7KZN9 410 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 THOC6Q86W42 341 aaKnown RBP11.8□□□□□ -0.52
SYNE2-214ENST00000554928 C17orf64Q86WR6 236 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 GPSM1Q86YR5 675 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ARHGEF39Q8N4T4 335 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ENDOVQ8N8Q3 282 aaKnown RBP11.8□□□□□ -0.52
SYNE2-214ENST00000554928 NEIL2Q969S2 332 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 SLC7A5P2Q9GIP4 190 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 VPS11Q9H270 941 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ACTL8Q9H568 366 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ENAMQ9NRM1 1142 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 CUTCQ9NTM9 273 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ANKMY1Q9P2S6 941 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 SNX7Q9UNH6 387 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 RUVBL1Q9Y265 456 aaKnown RBP11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ACOT9Q9Y305 439 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 FER1L5A0AVI2 2057 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 ANKRD12Q6UB98 2062 aa11.8□□□□□ -0.52
SYNE2-214ENST00000554928 HYKKA2RU49 373 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms