RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ADPRMQ3LIE5 342 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 SPDYE7PQ495Y7 208 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 C1QTNF12Q5T7M4 302 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 PEX13Q92968 403 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 SH3YL1Q96HL8 342 aaPredicted RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 CDK5RAP1Q96SZ6 601 aaKnown RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 DCSTAMPQ9H295 470 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 RAD18Q9NS91 495 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 E7EQ34 232 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 TNFRSF11BO00300 401 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 ERN1O75460 977 aaKnown RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 LRG1P02750 347 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 HTR1AP08908 422 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 EBLN1P0CF75 366 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 PRR35P0CG20 571 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 MAPK1P28482 360 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 FEN1P39748 380 aaKnown RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 ETV3P41162 512 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 CTSKP43235 329 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 DAPP51397 102 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 SNRPD1P62314 119 aaKnown RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 MC1RQ01726 317 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 SREBF2Q12772 1141 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 NEK5Q6P3R8 708 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 GALNT7Q86SF2 657 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 ZSWIM9Q86XI8 627 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 KLHDC8BQ8IXV7 354 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 AADATQ8N5Z0 425 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 ZBTB8BQ8NAP8 495 aaPredicted RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 PIH1D2Q8WWB5 315 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 ADPRHL2Q9NX46 363 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 F5P12259 2224 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 CKAP5Q14008 2032 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 TMEM202A6NGA9 273 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 FAM227AF5H4B4 570 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 H3BNC9 293 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 CCL16O15467 120 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 ETFAP13804 333 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 KDELR2P33947 212 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 CLCN4P51793 760 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 PRKAG1P54619 331 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 SP3Q02447 781 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 DPY19L1Q2PZI1 675 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 CRTC1Q6UUV9 634 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF605Q86T29 641 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 DPP10Q8N608 796 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 C7orf57Q8NEG2 295 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 Q96MT0 163 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 ALOXE3Q9BYJ1 711 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 GPR83Q9NYM4 423 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 FBXO10Q9UK96 956 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 PLAGL1Q9UM63 463 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 GMEB1Q9Y692 573 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 LOC285556D6RIA3 1793 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 PSMD11O00231 422 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 STSP08842 583 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 TAB1Q15750 504 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 C6orf183Q5T699 404 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 TNFAIP8L2Q6P589 184 aaPredicted RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 RAVER1Q8IY67 606 aaKnown RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 Q8N9G6 341 aaPredicted RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 GLB1L3Q8NCI6 653 aaPredicted RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 OR9Q2Q8NGE9 314 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 PLD4Q96BZ4 506 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 CASD1Q96PB1 797 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 VPS35Q96QK1 796 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 PKP4Q99569 1192 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 C14orf119Q9NWQ9 140 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 THG1LQ9NWX6 298 aaKnown RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 C5AR2Q9P296 337 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 INTS6Q9UL03 887 aaKnown RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 ERGIC3Q9Y282 383 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 ITM2BQ9Y287 266 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 CCDC88CQ9P219 2028 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF197O14709 1029 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 CD160O95971 181 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 KRT20P35900 424 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 AP1S1P61966 158 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 PPP2R2BQ00005 443 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 SMARCB1Q12824 385 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 CBX2Q14781 532 aaPredicted RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 INO80DQ53TQ3 878 aaPredicted RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 MEX3DQ86XN8 651 aaKnown RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 OR2AP1Q8NGE2 309 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 FAR1Q8WVX9 515 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 LGALS12Q96DT0 336 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 FEVQ99581 238 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 RIOK2Q9BVS4 552 aaKnown RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 GPBP1L1Q9HC44 474 aaPredicted RBP11.49□□□□□ -0.57
XRCC3-208ENST00000554811 MIEF1Q9NQG6 463 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 RPS6KA6Q9UK32 745 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF510Q9Y2H8 683 aa11.49□□□□□ -0.57
XRCC3-208ENST00000554811 TSC2P49815 1807 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 C5orf58C9J3I9 102 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 J3KTA2 159 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 AREL1O15033 823 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 SEC14L2O76054 403 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 MFN2O95140 757 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms