RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ABI3Q9P2A4 366 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 KLHL8Q9P2G9 620 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 LCMT1Q9UIC8 334 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 CRLS1Q9UJA2 301 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 NXT1Q9UKK6 140 aaKnown RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 MRPS2Q9Y399 296 aaKnown RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 PCDHB14Q9Y5E9 798 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 TRAV17A0A0B4J275 112 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 FITM1A5D6W6 292 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 CCL22O00626 93 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 WISP2O76076 250 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 UBOX5O94941 541 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 UNC5CO95185 931 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 AGTP01019 485 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 H2AFZP0C0S5 128 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 PRSS56P0CW18 603 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 RALBP11234 206 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 COX6A1P12074 109 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 ITGALP20701 1170 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 AGAP20933 346 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 MCM3P25205 808 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 ACRV1P26436 265 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 PKLRP30613 574 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 CDKN2BP42772 138 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 NR2C2P49116 596 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 CDKN1CP49918 316 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-219ENST00000553488 ARG2P78540 354 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 MESDQ14696 234 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 KIR2DS3Q14952 304 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 NR1I3Q14994 352 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 VWA2Q5GFL6 755 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 LRRC38Q5VT99 294 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 MTFR2Q6P444 385 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 RANBP10Q6VN20 620 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 H2AFVQ71UI9 128 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 HOOK3Q86VS8 718 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 TBC1D21Q8IYX1 336 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 CLDN19Q8N6F1 224 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 LINC01555Q8NAE3 123 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 OR5K2Q8NHB8 316 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 BRIX1Q8TDN6 353 aaKnown RBP6.94□□□□□ -1.3
ATXN3-219ENST00000553488 HEXDCQ8WVB3 486 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 C8orf44Q96CB5 159 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 C14orf79Q96F83 325 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 MAGEB10Q96LZ2 347 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-219ENST00000553488 VAT1Q99536 393 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 TREX2Q9BQ50 279 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-219ENST00000553488 C19orf43Q9BQ61 176 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 FSD1LQ9BXM9 530 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 GBA3Q9H227 469 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 FAM96AQ9H5X1 160 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF160Q9HCG1 818 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 CUTCQ9NTM9 273 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 PLAGL1Q9UM63 463 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 KLHL20Q9Y2M5 609 aa6.94□□□□□ -1.3
ATXN3-219ENST00000553488 PHF3Q92576 2039 aaKnown RBP6.93□□□□□ -1.3
ATXN3-219ENST00000553488 IGLV3-12A0A075B6K2 115 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 C5orf60A6NFR6 353 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 C2orf81A6NN90 581 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 MAP2K7O14733 419 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 LIN7AO14910 233 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-219ENST00000553488 CST8O60676 142 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 DIAPH2O60879 1101 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 USP1O94782 785 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 GYPCP04921 128 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 CELA2AP08217 269 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 GSTM1P09488 218 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 TMEM253P0C7T8 217 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 PRR35P0CG20 571 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 CAPN3P20807 821 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 MC4RP32245 332 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 TNNT3P45378 269 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-219ENST00000553488 OR1D4P47884 311 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 ARSFP54793 590 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 ZBED6P86452 979 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 CLCQ05315 142 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 KLC1Q07866 573 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 GRB7Q14451 532 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 C3AR1Q16581 482 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 ASTE1Q2TB18 679 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-219ENST00000553488 GPR33Q49SQ1 333 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 FILIP1LQ4L180 1135 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 YOD1Q5VVQ6 348 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-219ENST00000553488 ATG9BQ674R7 924 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 DENND5AQ6IQ26 1287 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 XKRXQ6PP77 449 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 TMEM207Q6UWW9 146 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 NLRP9Q7RTR0 991 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 PID1Q7Z2X4 250 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 SERPINA9Q86WD7 417 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 PIANPQ8IYJ0 282 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 METTL27Q8N6F8 245 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-219ENST00000553488 CTNNBL1Q8WYA6 563 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-219ENST00000553488 HAS2Q92819 552 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 APOL2Q9BQE5 337 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 CRB3Q9BUF7 120 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 ASPNQ9BXN1 380 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 MAK16Q9BXY0 300 aaKnown RBP6.93□□□□□ -1.3
ATXN3-219ENST00000553488 RNF32Q9H0A6 362 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 VPS37BQ9H9H4 285 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms