RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 PCDHB9Q9Y5E1 797 aa12□□□□□ -0.49
HDAC7-230ENST00000552960 C2orf78A6NCI8 922 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 SLC38A8A6NNN8 435 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 TFECO14948 347 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 SLC25A14O95258 325 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 MED26O95402 600 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 FABP3P05413 133 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 CLTBP09497 229 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 BMPR1AP36894 532 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 CTSKP43235 329 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 RPS14P62263 151 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 ZXDBP98169 803 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 DMC1Q14565 340 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 KIAA1614Q5VZ46 1190 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 RNF175Q8N4F7 328 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 KCNJ9Q92806 393 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 APOLD1Q96LR9 279 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 EXOSC4Q9NPD3 245 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 QPCTLQ9NXS2 382 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 FAM8A1Q9UBU6 413 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 OSGIN1Q9UJX0 560 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 PCDHGB1Q9Y5G3 927 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 ABCB1P08183 1280 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 ITGAMP11215 1152 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 TACR2P21452 398 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 AZGP1P25311 298 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 NPRL3Q12980 569 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 SPANXN2Q5MJ10 180 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 ANKS3Q6ZW76 656 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 PRSS48Q7RTY5 328 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 CCDC71Q8IV32 467 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 MMAAQ8IVH4 418 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 STX19Q8N4C7 294 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 PEX13Q92968 403 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 PANX1Q96RD7 426 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 MMP27Q9H306 513 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 FBXO44Q9H4M3 255 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 SP140LQ9H930 580 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 TRIM39Q9HCM9 518 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 CCNB1IP1Q9NPC3 277 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 THG1LQ9NWX6 298 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 SIRT5Q9NXA8 310 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 THUMPD1Q9NXG2 353 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 AGO1Q9UL18 857 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 SAMD4AQ9UPU9 718 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 NINQ8N4C6 2090 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 OR2A25A4D2G3 310 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 ANKRD66B4E2M5 251 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 M0QX08 132 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 TAPBPO15533 448 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 PRAMEF12O95522 483 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 STSP08842 583 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 ALPIP09923 528 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 POU2F1P14859 743 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 DNAJA1P31689 397 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 PPP3CCP48454 512 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 SGSHP51688 502 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 MAD2L1Q13257 205 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 CAMK2GQ13555 558 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 DDX39BQ13838 428 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 PPP2R2DQ66LE6 453 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 TXNDC15Q96J42 360 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 ZFYVE19Q96K21 471 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 SLC22A12Q96S37 553 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 MRPL9Q9BYD2 267 aaKnown RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 FAM126AQ9BYI3 521 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 TAS2R16Q9NYV7 291 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 EHD3Q9NZN3 535 aa11.99□□□□□ -0.49
HDAC7-230ENST00000552960 ZFP37Q9Y6Q3 630 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 COL4A4P53420 1690 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-230ENST00000552960 PATJQ8NI35 1801 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 KRT87PA6NCN2 255 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 TLL1O43897 1013 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 PRLP01236 227 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 EPB42P16452 691 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 HOXA9P31269 272 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 GRK5P34947 590 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 TGFBR2P37173 567 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 MAGEA11P43364 429 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 MRPL19P49406 292 aaKnown RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CRISP3P54108 245 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ARPC4P59998 168 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 RACK1P63244 317 aaKnown RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 FAM214AQ32MH5 1076 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 GDPD3Q7L5L3 318 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 SPPL2AQ8TCT8 520 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ZNF566Q969W8 418 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 TADA1Q96BN2 335 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 HSH2DQ96JZ2 352 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 TRIB3Q96RU7 358 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CENPOQ9BU64 300 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ELOVL6Q9H5J4 265 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 RERGLQ9H628 205 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CLMPQ9H6B4 373 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 GPR83Q9NYM4 423 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 KNL1Q8NG31 2342 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 SLC28A1O00337 649 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 WBP4O75554 376 aaKnown RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 EFEMP2O95967 443 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms