RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 BECN2A8MW95 431 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 A8MXQ7 604 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 K7EM74 188 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 K7ERQ8 282 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 GTPBP1O00178 669 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CYR61O00622 381 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PDXKO00764 312 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 MCF2LO15068 1137 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SCAMP1O15126 338 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ACSL4O60488 711 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 RTN2O75298 545 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SEC14L2O76054 403 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 GCNT3O95395 438 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 BMP15O95972 392 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ADAP00813 363 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 IGLV2-14P01704 120 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CSF2P04141 144 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 DLATP10515 647 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 IRF1P10914 325 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CDK4P11802 303 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 GNSP15586 552 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 GOT1P17174 413 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CD38P28907 300 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 BSGP35613 385 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CPOXP36551 454 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CSKP41240 450 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PTPN9P43378 593 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CLK3P49761 638 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 STK19P49842 368 aaPredicted RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 BLKP51451 505 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 DRG2P55039 364 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 RPS3AP61247 264 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ASIC1P78348 528 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 COG7P83436 770 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 IL9RQ01113 521 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 DPTQ07507 201 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 OVGP1Q12889 678 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 IHHQ14623 411 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 TAF11Q15544 211 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 TGIF1Q15583 401 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CST6Q15828 149 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CCNG2Q16589 344 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SGSM1Q2NKQ1 1148 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 RAB6CQ53S08 254 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ALG10Q5BKT4 473 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ALG10BQ5I7T1 473 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 MS4A13Q5J8X5 152 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF362Q5T0B9 420 aaPredicted RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 KIAA1614Q5VZ46 1190 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 RESP18Q5W5W9 173 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 FAM205BPQ63HN1 556 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ATG9BQ674R7 924 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 AAGABQ6PD74 315 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 LCLAT1Q6UWP7 414 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CHST9Q7L1S5 443 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PXKQ7Z7A4 578 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC25Q86WR0 208 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 LDLRAD3Q86YD5 345 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 Q8N1X5 172 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PELI3Q8N2H9 469 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 DPP10Q8N608 796 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 EID2Q8N6I1 236 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PLD5Q8N7P1 536 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 BMPERQ8N8U9 685 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ENGASEQ8NFI3 743 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SEMA6DQ8NFY4 1073 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 GPR150Q8NGU9 434 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF398Q8TD17 642 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 WFIKKN2Q8TEU8 576 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 FAR1Q8WVX9 515 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PRCCQ92733 491 aaPredicted RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SLC35C1Q96A29 364 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SYAP1Q96A49 352 aaPredicted RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 EXOC4Q96A65 974 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC127Q96BQ5 260 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 KLHL29Q96CT2 875 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 NXPE2Q96DL1 559 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PAGE5Q96GU1 130 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CNDP2Q96KP4 475 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 APOLD1Q96LR9 279 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC43Q96MW1 224 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF578Q96N58 590 aaPredicted RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 XPO6Q96QU8 1125 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 FAM118BQ9BPY3 351 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 NUDT16L1Q9BRJ7 211 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 KRTAP17-1Q9BYP8 105 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PANK2Q9BZ23 570 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 ULBP1Q9BZM6 244 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 RAB6CQ9H0N0 254 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 LHX5Q9H2C1 402 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC68Q9H2F9 335 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 TCEAL2Q9H3H9 227 aaPredicted RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CLMPQ9H6B4 373 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SYNCQ9H7C4 482 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 POLR1BQ9H9Y6 1135 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 MOV10Q9HCE1 1003 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 MLXIPLQ9NP71 852 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PCDHB16Q9NRJ7 776 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CISHQ9NSE2 258 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 FAM49BQ9NUQ9 324 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms