RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 MAP2K7O14733 419 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 SRPX2O60687 465 aaPredicted RBP21.57■■□□□ 1.04
BRF1-216ENST00000550208 WDR47O94967 919 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 S100BP04271 92 aaPredicted RBP21.57■■□□□ 1.04
BRF1-216ENST00000550208 HSPA7P48741 367 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 ARF3P61204 181 aaPredicted RBP21.57■■□□□ 1.04
BRF1-216ENST00000550208 MAP7Q14244 749 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 WASHC2DQ5SRD0 308 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 CATSPEREQ5SY80 951 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 TLDC1Q6P9B6 456 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 VASH2Q86V25 355 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 ESX1Q8N693 406 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 IL22RA1Q8N6P7 574 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 NEIL2Q969S2 332 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 CLIP3Q96DZ5 547 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 CABS1Q96KC9 395 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 TSNARE1Q96NA8 513 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 ZNF285Q96NJ3 590 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 PPCSQ9HAB8 311 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 SSUH2Q9Y2M2 353 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 DYRK1BQ9Y463 629 aa21.57■■□□□ 1.04
BRF1-216ENST00000550208 LOC101059948A0A1B0GTJ6 334 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 TLDC2A0PJX2 215 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 CCDC189A1A4V9 331 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 GOLGA8RI6L899 631 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 CPNE3O75131 537 aaKnown RBP21.56■■□□□ 1.04
BRF1-216ENST00000550208 MT-ND3P03897 115 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 NUDT17P0C025 328 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 CCNYL3P0C7X3 344 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 ATP1A2P50993 1020 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 RELAQ04206 551 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 TLE3Q04726 772 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 GPS2Q13227 327 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 TECRLQ5HYJ1 363 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 MREGQ8N565 214 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 ABHD11Q8NFV4 315 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 SLC5A11Q8WWX8 675 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 SCYL1Q96KG9 808 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 OR2A5Q96R48 311 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 PCMTD2Q9NV79 361 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 PADI1Q9ULC6 663 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 AP1M2Q9Y6Q5 423 aa21.56■■□□□ 1.04
BRF1-216ENST00000550208 SYCE1LA8MT33 242 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 ZSCAN9O15535 394 aaPredicted RBP21.55■■□□□ 1.04
BRF1-216ENST00000550208 EFSO43281 561 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 LCMT2O60294 686 aaKnown RBP21.55■■□□□ 1.04
BRF1-216ENST00000550208 STK16O75716 305 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 EIF2S1P05198 315 aaKnown RBP21.55■■□□□ 1.04
BRF1-216ENST00000550208 RBP1P09455 135 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 PYGBP11216 843 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 EZRP15311 586 aaKnown RBP21.55■■□□□ 1.04
BRF1-216ENST00000550208 AGTR2P50052 363 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 CCR8P51685 355 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 MEF2AQ02078 507 aaPredicted RBP21.55■■□□□ 1.04
BRF1-216ENST00000550208 ABHD18Q0P651 414 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 TCTE1Q5JU00 501 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 MANEAQ5SRI9 462 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 FAM199XQ6PEV8 388 aaPredicted RBP21.55■■□□□ 1.04
BRF1-216ENST00000550208 OR4K1Q8NGD4 311 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 CD244Q9BZW8 370 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 SLC7A5P2Q9GIP4 190 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 LHX9Q9NQ69 397 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 ASB1Q9Y576 335 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 KCNE2Q9Y6J6 123 aa21.55■■□□□ 1.04
BRF1-216ENST00000550208 FEZF1A0PJY2 475 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 MEN1O00255 615 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 HBQ1P09105 142 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 RORAP35398 523 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 RASA2Q15283 850 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 TSNAXIP1Q2TAA8 658 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 LCN10Q6JVE6 187 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 C19orf48Q6RUI8 117 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 NXPE4Q6UWF7 544 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 DSELQ8IZU8 1212 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 LRFN5Q96NI6 719 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 CCNL2Q96S94 520 aaPredicted RBP21.54■■□□□ 1.04
BRF1-216ENST00000550208 CNOT10Q9H9A5 744 aaKnown RBP21.54■■□□□ 1.04
BRF1-216ENST00000550208 ENAMQ9NRM1 1142 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 DNAJC11Q9NVH1 559 aa21.54■■□□□ 1.04
BRF1-216ENST00000550208 CPSF2Q9P2I0 782 aaKnown RBP21.54■■□□□ 1.04
BRF1-216ENST00000550208 DHCR7Q9UBM7 475 aaKnown RBP21.54■■□□□ 1.04
BRF1-216ENST00000550208 MDC1Q14676 2089 aaKnown RBP21.53■■□□□ 1.04
BRF1-216ENST00000550208 KLK8O60259 260 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 CCNT2O60583 730 aaKnown RBP21.53■■□□□ 1.04
BRF1-216ENST00000550208 CDH16O75309 829 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 IPO13O94829 963 aaKnown RBP21.53■■□□□ 1.04
BRF1-216ENST00000550208 STAT5AP42229 794 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 GCGRP47871 477 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 IFFO1Q0D2I5 559 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 GRM7Q14831 915 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 PFKFB4Q16877 469 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 C1orf189Q5VU69 101 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 BROXQ5VW32 411 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 RHBDD2Q6NTF9 364 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 TMEM151AQ8N4L1 468 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 SNX31Q8N9S9 440 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 ZNF740Q8NDX6 193 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 ACMSDQ8TDX5 336 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 MR1Q95460 341 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 NDC1Q9BTX1 674 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms