RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 MIPEPQ99797 713 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 CADM1Q9BY67 442 aaKnown RBP19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 ABCG8Q9H221 673 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 ABCA12Q86UK0 2595 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 TMEM233B4DJY2 109 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 NUAK1O60285 661 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 CCL4P13236 92 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 PKNOX1P55347 436 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 RIPPLY3P57055 190 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 FRA10AC1Q70Z53 315 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 HID1Q8IV36 788 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 OR56A4Q8NGH8 313 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 SSC4DQ8WTU2 575 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 UBTD2Q8WUN7 234 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 DTD2Q96FN9 168 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 TAAR9Q96RI9 348 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 RIOK2Q9BVS4 552 aaKnown RBP19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 SEMA6CQ9H3T2 930 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 TNFRSF12AQ9NP84 129 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 MID1IP1Q9NPA3 183 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 PCDHGA3Q9Y5H0 932 aa19.32■□□□□ 0.68
CTDSP2-204ENST00000548823 CENPEQ02224 2701 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 PRR19A6NJB7 356 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 WFS1O76024 890 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 RASGRP1O95267 797 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 JUNP05412 331 aaKnown RBP19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 ENO2P09104 434 aaPredicted RBP19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 GM2AP17900 193 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 ETV3P41162 512 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 CDH13P55290 713 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 CDKL1Q00532 357 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 TCEA2Q15560 299 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 RPS27LQ71UM5 84 aaKnown RBP19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 PARP9Q8IXQ6 854 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 SCAMP4Q969E2 229 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 SLC45A3Q96JT2 553 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 CCT7Q99832 543 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 C1QTNF7Q9BXJ2 289 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 PFDN4Q9NQP4 134 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 PTBP2Q9UKA9 531 aaKnown RBP19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 ITM2BQ9Y287 266 aa19.31■□□□□ 0.68
CTDSP2-204ENST00000548823 LRRC14BA6NHZ5 514 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 E2F3O00716 465 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 SLC16A5O15375 505 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 VPS4BO75351 444 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 ESRRBO95718 433 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 FTH1P02794 183 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 THRAP10827 490 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 ATP4BP51164 291 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 MLLT10P55197 1068 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 ALG11Q2TAA5 492 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 WASHC2DQ5SRD0 308 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 SULT1C3Q6IMI6 304 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 RP9Q8TA86 221 aaKnown RBP19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 TRPC4APQ8TEL6 797 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 APOBEC4Q8WW27 367 aaKnown RBP19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 GLYATL1Q969I3 302 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 TSACCQ96A04 125 aaPredicted RBP19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 NSUN5Q96P11 429 aaKnown RBP19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 ZNF382Q96SR6 550 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 MBNL1Q9NR56 388 aaKnown RBP19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 CD84Q9UIB8 345 aa19.3■□□□□ 0.68
CTDSP2-204ENST00000548823 LRP4O75096 1905 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 FADS2P1A8MWK0 482 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 NKX2-8O15522 239 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 C8GP07360 202 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 COX4I1P13073 169 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 VCLP18206 1134 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 MSH3P20585 1137 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 PIK3R1P27986 724 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 AKT1P31749 480 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 CCR7P32248 378 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 UQCRFS1P47985 274 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 DPTQ07507 201 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 SP140Q13342 867 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 ACOX1Q15067 660 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 NXNQ6DKJ4 435 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 OGFOD3Q6PK18 319 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 LARP4Q71RC2 724 aaKnown RBP eCLIP19.29■□□□□ 0.688e-13■□□□□ 8.6
CTDSP2-204ENST00000548823 RASGRP3Q8IV61 690 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 TP53I13Q8NBR0 393 aaPredicted RBP19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 RBM15BQ8NDT2 890 aaKnown RBP19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 AP2M1Q96CW1 435 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 HGH1Q9BTY7 390 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 ZBTB26Q9HCK0 441 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 LRIT1Q9P2V4 623 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 DNAJC15Q9Y5T4 150 aa19.29■□□□□ 0.68
CTDSP2-204ENST00000548823 LRBAP50851 2863 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 SGTAO43765 313 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 SKAP2O75563 359 aaPredicted RBP19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 TM7SF2O76062 418 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 UROSP10746 265 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 EZRP15311 586 aaKnown RBP19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 CPOXP36551 454 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 AGTR2P50052 363 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 RAP1GDS1P52306 607 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 CAPRIN2Q6IMN6 1127 aaKnown RBP19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 RD3Q7Z3Z2 195 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 FAM13CQ8NE31 585 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 MCUR1Q96AQ8 359 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms