RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PPFIBP2Q8ND30 876 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 CPT1CQ8TCG5 803 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 EEF1AKMT1Q8WVE0 214 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 MIEF2Q96C03 454 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 THAP11Q96EK4 314 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 NDNQ99608 321 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 PLAAQ9Y263 795 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 VWA7Q9Y334 891 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 TEX264Q9Y6I9 313 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 MAU2Q9Y6X3 613 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 MYO18BQ8IUG5 2567 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 IGLV3-12A0A075B6K2 115 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 KCNE1BA0A087WTH5 132 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 IGKV1-8A0A0C4DH67 115 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 H7BY64 318 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 SORBS2O94875 1100 aaKnown RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 SEC31AO94979 1220 aaKnown RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 ANXA5P08758 320 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 ZGLP1P0C6A0 271 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 FBLP22087 321 aaKnown RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 CXCR2P25025 360 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 ITGA3P26006 1051 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 GABRB3P28472 473 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 GRK3P35626 688 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 ITGA8P53708 1063 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 AP1S2P56377 157 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 RPS15AP62244 130 aaKnown RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 YBX1P67809 324 aaKnown RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 UBAP2LQ14157 1087 aaKnown RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 TUBB8Q3ZCM7 444 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 FAM45BPQ6NSW5 357 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 KIRREL2Q6UWL6 708 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 IGDCC3Q8IVU1 814 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 ZADH2Q8N4Q0 377 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 GALNT11Q8NCW6 608 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 FAM45AQ8TCE6 357 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 STT3BQ8TCJ2 826 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 ATL1Q8WXF7 558 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 PRAP1Q96NZ9 151 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 HAUS8Q9BT25 410 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 CRB3Q9BUF7 120 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 DRC3Q9H069 523 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 SOX17Q9H6I2 414 aaPredicted RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 ZNF552Q9H707 407 aaPredicted RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 MKKSQ9NPJ1 570 aaPredicted RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 ABCF3Q9NUQ8 709 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 C14orf105Q9NVL8 296 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 NSMCE4AQ9NXX6 385 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 STOX2Q9P2F5 926 aaPredicted RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 CTSFQ9UBX1 484 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 PDE10AQ9Y233 779 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 RUVBL1Q9Y265 456 aaKnown RBP10.85□□□□□ -0.67
BEST3-209ENST00000548658 B3GNT3Q9Y2A9 372 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 MAP4K5Q9Y4K4 846 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 HS3ST3B1Q9Y662 390 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 TENM4Q6N022 2769 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 HEATR5BQ9P2D3 2071 aa10.85□□□□□ -0.67
BEST3-209ENST00000548658 EFCAB8A8MWE9 144 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 SOCS6O14544 535 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 TTI1O43156 1089 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 NRP2O60462 931 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 BANF1O75531 89 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 F7P08709 466 aaPredicted RBP10.84□□□□□ -0.67
BEST3-209ENST00000548658 ENO2P09104 434 aaPredicted RBP10.84□□□□□ -0.67
BEST3-209ENST00000548658 NUDT7P0C024 238 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 ACPPP15309 386 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 SLC26A3P40879 764 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 AVPR1BP47901 424 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 CDKN2DP55273 166 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 TBPL1P62380 186 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 AP2B1P63010 937 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 TIAL1Q01085 375 aaKnown RBP eCLIP10.84□□□□□ -0.67
BEST3-209ENST00000548658 KLC1Q07866 573 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 CALCOCO2Q13137 446 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 CBLBQ13191 982 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 RAPSNQ13702 412 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 HECTD2Q5U5R9 776 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 AGAP7PQ5VUJ5 663 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 STEAP4Q687X5 459 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 SLC6A19Q695T7 634 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 CAPN13Q6MZZ7 669 aaPredicted RBP10.84□□□□□ -0.67
BEST3-209ENST00000548658 AGTRAPQ6RW13 159 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 MAATS1Q7Z4T9 603 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 C17orf64Q86WR6 236 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 IQCKQ8N0W5 287 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 FAM26EQ8N5C1 309 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 METTL27Q8N6F8 245 aaPredicted RBP10.84□□□□□ -0.67
BEST3-209ENST00000548658 RBMXL3Q8N7X1 1067 aaKnown RBP10.84□□□□□ -0.67
BEST3-209ENST00000548658 GPATCH11Q8N954 259 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 ANKRD7Q92527 254 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 MMABQ96EY8 250 aaPredicted RBP10.84□□□□□ -0.67
BEST3-209ENST00000548658 LINGO1Q96FE5 620 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 CFAP36Q96G28 342 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 PDLIM5Q96HC4 596 aaKnown RBP10.84□□□□□ -0.67
BEST3-209ENST00000548658 C10orf90Q96M02 699 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 AGAP4Q96P64 663 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 YIPF2Q9BWQ6 316 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 SLC29A3Q9BZD2 475 aa10.84□□□□□ -0.67
BEST3-209ENST00000548658 TGIF2Q9GZN2 237 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms