RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 KRT15P19012 456 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 ITPKBP27987 946 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 GRK3P35626 688 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 SLC6A12P48065 614 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 HSPA7P48741 367 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 WASHC2DQ5SRD0 308 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 FRMPD2BQ6IN97 320 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 RNF44Q7L0R7 432 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 VASH2Q86V25 355 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 TDRPQ86YL5 185 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 PLD3Q8IV08 490 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 SNX31Q8N9S9 440 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 TTC29Q8NA56 475 aaPredicted RBP16.11■□□□□ 0.17
LTBR-215ENST00000546296 PDPRQ8NCN5 879 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 OR2W6PQ8NHA6 318 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 SLC5A11Q8WWX8 675 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 MR1Q95460 341 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 GPR78Q96P69 363 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 CCNL2Q96S94 520 aaPredicted RBP16.11■□□□□ 0.17
LTBR-215ENST00000546296 STARD5Q9NSY2 213 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 TXLNGQ9NUQ3 528 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 ZNF358Q9NW07 568 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 PTBP2Q9UKA9 531 aaKnown RBP16.11■□□□□ 0.17
LTBR-215ENST00000546296 ANKRD11Q6UB99 2663 aaPredicted RBP16.11■□□□□ 0.17
LTBR-215ENST00000546296 LOC105369274A0A096LPK9 316 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 LOC102723532A0A0G2JNH3 316 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 H0YGG7 62 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 GOLGA8RI6L899 631 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 CCNT2O60583 730 aaKnown RBP16.1■□□□□ 0.17
LTBR-215ENST00000546296 CDH16O75309 829 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 NUDT17P0C025 328 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 ALAS2P22557 587 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 GGT5P36269 586 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 ARF3P61204 181 aaPredicted RBP16.1■□□□□ 0.17
LTBR-215ENST00000546296 CSNK1G2P78368 415 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 RELAQ04206 551 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 TLE3Q04726 772 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 ABHD18Q0P651 414 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 GRM7Q14831 915 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 FBXO48Q5FWF7 155 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 OR4N4Q8N0Y3 316 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 TBC1D19Q8N5T2 526 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 SLC38A9Q8NBW4 561 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 ACMSDQ8TDX5 336 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 NEIL2Q969S2 332 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 ESAMQ96AP7 390 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 TMEM79Q9BSE2 394 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 CAPS2Q9BXY5 557 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 CD244Q9BZW8 370 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 DNAJC11Q9NVH1 559 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 CPSF2Q9P2I0 782 aaKnown RBP16.1■□□□□ 0.17
LTBR-215ENST00000546296 SRPK3Q9UPE1 567 aa16.1■□□□□ 0.17
LTBR-215ENST00000546296 MEN1O00255 615 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 MAP2K7O14733 419 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 CLGNO14967 610 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 H2AFYO75367 372 aaKnown RBP16.09■□□□□ 0.17
LTBR-215ENST00000546296 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 PYGBP11216 843 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 GNAZP19086 355 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 AGXTP21549 392 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 STAT5AP42229 794 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 ARSFP54793 590 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 UCNP55089 124 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 RPS15AP62244 130 aaKnown RBP16.09■□□□□ 0.17
LTBR-215ENST00000546296 CDC16Q13042 620 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 GPS2Q13227 327 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 COL9A2Q14055 689 aaPredicted RBP16.09■□□□□ 0.17
LTBR-215ENST00000546296 PFKFB4Q16877 469 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 FAM214AQ32MH5 1076 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 TECRLQ5HYJ1 363 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 CATSPEREQ5SY80 951 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 C1orf189Q5VU69 101 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 NXPE4Q6UWF7 544 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 KLHDC8AQ8IYD2 350 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 MREGQ8N565 214 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 CSNK1A1LQ8N752 337 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 ABHD11Q8NFV4 315 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 MRPL57Q9BQC6 102 aaKnown RBP16.09■□□□□ 0.17
LTBR-215ENST00000546296 GPN2Q9H9Y4 310 aaPredicted RBP16.09■□□□□ 0.17
LTBR-215ENST00000546296 LHX9Q9NQ69 397 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 NDOR1Q9UHB4 597 aa16.09■□□□□ 0.17
LTBR-215ENST00000546296 ACACAQ13085 2346 aa16.08■□□□□ 0.17
LTBR-215ENST00000546296 ADAMTS20P59510 1910 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 LOC101059948A0A1B0GTJ6 334 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 A0A1W2PPM1 405 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 FEZF1A0PJY2 475 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 HYKKA2RU49 373 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 H3BMH7 237 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 SMIM24O75264 130 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 ERLIN1O75477 346 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 TCN2P20062 427 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 DLSTP36957 453 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 AGTR2P50052 363 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 ALDH18A1P54886 795 aaKnown RBP16.08■□□□□ 0.16
LTBR-215ENST00000546296 MEF2AQ02078 507 aaPredicted RBP16.08■□□□□ 0.16
LTBR-215ENST00000546296 RASA2Q15283 850 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 PDK4Q16654 411 aa16.08■□□□□ 0.16
LTBR-215ENST00000546296 YOD1Q5VVQ6 348 aaPredicted RBP16.08■□□□□ 0.16
LTBR-215ENST00000546296 FAM199XQ6PEV8 388 aaPredicted RBP16.08■□□□□ 0.16
LTBR-215ENST00000546296 C19orf48Q6RUI8 117 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms