RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 APOBEC4Q8WW27 367 aaKnown RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 FKBP10Q96AY3 582 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 FBXL8Q96CD0 374 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 FUT8Q9BYC5 575 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 SEMA4CQ9C0C4 833 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 DERL2Q9GZP9 239 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 GPAMQ9HCL2 828 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 SLC22A11Q9NSA0 550 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 TMEM184CQ9NVA4 438 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 CUEDC1Q9NWM3 386 aaPredicted RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 IKZF3Q9UKT9 509 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 PADI2Q9Y2J8 665 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 KCNMB2Q9Y691 235 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 HEATR5BQ9P2D3 2071 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 KCNE1BA0A087WTH5 132 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 HYKKA2RU49 373 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 CDC14CA4D256 554 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 H0YGG7 62 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 ALBP02768 609 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 FAM87AP0C7U9 286 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 ITGAXP20702 1163 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 ECHS1P30084 290 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 PMS2P54278 862 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 POLE2P56282 527 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 ARF3P61204 181 aaPredicted RBP11.34□□□□□ -0.59
YBX3-217ENST00000546164 NFKB2Q00653 900 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 IL10RAQ13651 578 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 USP10Q14694 798 aaKnown RBP11.34□□□□□ -0.59
YBX3-217ENST00000546164 MUM1Q2TAK8 710 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 GARNL3Q5VVW2 1013 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 CAPN13Q6MZZ7 669 aaPredicted RBP11.34□□□□□ -0.59
YBX3-217ENST00000546164 TTLL10Q6ZVT0 673 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 C17orf64Q86WR6 236 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 APLFQ8IW19 511 aaPredicted RBP11.34□□□□□ -0.59
YBX3-217ENST00000546164 ZNF843Q8N446 348 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 PPM1NQ8N819 430 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 ABHD11Q8NFV4 315 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 MVB12AQ96EY5 273 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 FMO2Q99518 471 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 HAUS8Q9BT25 410 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 ATG10Q9H0Y0 220 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 SLC26A1Q9H2B4 701 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 SYNPO2LQ9H987 977 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 CAB39LQ9H9S4 337 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 STARD5Q9NSY2 213 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 NINJ2Q9NZG7 142 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 IFT80Q9P2H3 777 aaPredicted RBP11.34□□□□□ -0.59
YBX3-217ENST00000546164 OARD1Q9Y530 152 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 PCM1Q15154 2024 aa11.34□□□□□ -0.59
YBX3-217ENST00000546164 HELZ2Q9BYK8 2649 aaKnown RBP11.33□□□□□ -0.6
YBX3-217ENST00000546164 NPEPPSL1A6NEC2 478 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 H7BY64 318 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 CDC7O00311 574 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 TXNDC9O14530 226 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 HAT1O14929 419 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 PRB1P04280 392 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 PIM1P11309 404 aaPredicted RBP11.33□□□□□ -0.6
YBX3-217ENST00000546164 NPPBP16860 134 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 STMN1P16949 149 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 ALAS2P22557 587 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 PHBP35232 272 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 HNMTP50135 292 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 RAB10P61026 200 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 ATP6V0D1P61421 351 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 RPS15AP62244 130 aaKnown RBP11.33□□□□□ -0.6
YBX3-217ENST00000546164 CSNK1G2P78368 415 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 KCNAB2Q13303 367 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 PRMT9Q6P2P2 845 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 OVCH1Q7RTY7 1134 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 ADCK2Q7Z695 626 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 ARHGEF39Q8N4T4 335 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 CSNK1A1LQ8N752 337 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 OR2Y1Q8NGV0 311 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 NACC2Q96BF6 587 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 THAP11Q96EK4 314 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 UBXN10Q96LJ8 280 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 C10orf90Q96M02 699 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 PRAP1Q96NZ9 151 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 CYTH2Q99418 400 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 SARGQ9BW04 601 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 ACSS3Q9H6R3 686 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 WDR54Q9H977 334 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 CTNNAL1Q9UBT7 734 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 NDOR1Q9UHB4 597 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 GPN3Q9UHW5 284 aaPredicted RBP11.33□□□□□ -0.6
YBX3-217ENST00000546164 MAN2B2Q9Y2E5 1009 aa11.33□□□□□ -0.6
YBX3-217ENST00000546164 PHGDHO43175 533 aaKnown RBP11.32□□□□□ -0.6
YBX3-217ENST00000546164 CNOT3O75175 753 aaKnown RBP11.32□□□□□ -0.6
YBX3-217ENST00000546164 MED26O95402 600 aa11.32□□□□□ -0.6
YBX3-217ENST00000546164 GUCA1CO95843 209 aa11.32□□□□□ -0.6
YBX3-217ENST00000546164 EIF2S1P05198 315 aaKnown RBP11.32□□□□□ -0.6
YBX3-217ENST00000546164 ANXA5P08758 320 aa11.32□□□□□ -0.6
YBX3-217ENST00000546164 CD1DP15813 335 aa11.32□□□□□ -0.6
YBX3-217ENST00000546164 CRABP2P29373 138 aa11.32□□□□□ -0.6
YBX3-217ENST00000546164 SLC26A3P40879 764 aa11.32□□□□□ -0.6
YBX3-217ENST00000546164 CSRP3P50461 194 aa11.32□□□□□ -0.6
YBX3-217ENST00000546164 C19orf57Q0VDD7 668 aa11.32□□□□□ -0.6
YBX3-217ENST00000546164 SSPNQ14714 243 aa11.32□□□□□ -0.6
YBX3-217ENST00000546164 EFTUD2Q15029 972 aaKnown RBP eCLIP11.32□□□□□ -0.6
YBX3-217ENST00000546164 TSNQ15631 228 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms