RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CD82P27701 267 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 CSNK1G2P78368 415 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 SLC18A2Q05940 514 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 SETDB1Q15047 1291 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 KRT71Q3SY84 523 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 LRIG3Q6UXM1 1119 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 OR4K1Q8NGD4 311 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 SNIP1Q8TAD8 396 aaKnown RBP19.62■□□□□ 0.73
HMGA2-211ENST00000545998 ZNF285Q96NJ3 590 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 ZFYVE21Q9BQ24 234 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 ENAMQ9NRM1 1142 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 DNAJC11Q9NVH1 559 aa19.62■□□□□ 0.73
HMGA2-211ENST00000545998 A0A0J9YVX5 310 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 TMEM8BA6NDV4 472 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.61■□□□□ 0.73
HMGA2-211ENST00000545998 ZNF28P17035 718 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 PCBP4P57723 403 aaKnown RBP19.61■□□□□ 0.73
HMGA2-211ENST00000545998 CDC16Q13042 620 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 CATSPEREQ5SY80 951 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 FRMPD2BQ6IN97 320 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 C16orf46Q6P387 395 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 LRRC70Q7Z2Q7 622 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 ZFAND4Q86XD8 727 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 C4orf33Q8N1A6 199 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 SELENOSQ9BQE4 189 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 ULBP3Q9BZM4 244 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 SPRTNQ9H040 489 aaPredicted RBP19.61■□□□□ 0.73
HMGA2-211ENST00000545998 SYNPO2LQ9H987 977 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 GPRC5BQ9NZH0 403 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 TMCO1Q9UM00 188 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 TMEM184BQ9Y519 407 aaPredicted RBP19.61■□□□□ 0.73
HMGA2-211ENST00000545998 CCNT2O60583 730 aaKnown RBP19.61■□□□□ 0.73
HMGA2-211ENST00000545998 GLRA3O75311 464 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 OR2B3O76000 313 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 STK17BO94768 372 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 DLGAP3O95886 979 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 GNAZP19086 355 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 CRHR1P34998 444 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 CCR8P51685 355 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 TMEM126BQ8IUX1 230 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 KDF1Q8NAX2 398 aaPredicted RBP19.61■□□□□ 0.73
HMGA2-211ENST00000545998 ZCCHC14Q8WYQ9 949 aaKnown RBP19.61■□□□□ 0.73
HMGA2-211ENST00000545998 OR2A5Q96R48 311 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 PELI2Q9HAT8 420 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 EMCNQ9ULC0 261 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 PCDHB3Q9Y5E6 796 aa19.61■□□□□ 0.73
HMGA2-211ENST00000545998 DSPP15924 2871 aaKnown RBP19.61■□□□□ 0.73
HMGA2-211ENST00000545998 LOC105369274A0A096LPK9 316 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 LOC102723532A0A0G2JNH3 316 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 E7EQ34 232 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 STMND1H3BQB6 276 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 K7EPI3 171 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 SRPX2O60687 465 aaPredicted RBP19.6■□□□□ 0.73
HMGA2-211ENST00000545998 SMIM24O75264 130 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 SCRG1O75711 98 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 KIAA0754O94854 1291 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 CCT5P48643 541 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 PDK4Q16654 411 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 CEP85LQ5SZL2 805 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 PRAMEF17Q5VTA0 474 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 NXPE4Q6UWF7 544 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 DTX1Q86Y01 620 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 PLD3Q8IV08 490 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 SRRM1Q8IYB3 904 aaKnown RBP19.6■□□□□ 0.73
HMGA2-211ENST00000545998 GPR135Q8IZ08 494 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 OR4N4Q8N0Y3 316 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 PTGR2Q8N8N7 351 aaPredicted RBP19.6■□□□□ 0.73
HMGA2-211ENST00000545998 PHF21BQ96EK2 531 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 RNF31Q96EP0 1072 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 CAPS2Q9BXY5 557 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 MKS1Q9NXB0 559 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 FER1L5A0AVI2 2057 aa19.6■□□□□ 0.73
HMGA2-211ENST00000545998 LRRC14BA6NHZ5 514 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 TAF4O00268 1085 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 COPEO14579 308 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 H2AFXP16104 143 aaPredicted RBP19.59■□□□□ 0.73
HMGA2-211ENST00000545998 EPORP19235 508 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 VSX2P58304 361 aaPredicted RBP19.59■□□□□ 0.73
HMGA2-211ENST00000545998 RPS15AP62244 130 aaKnown RBP19.59■□□□□ 0.73
HMGA2-211ENST00000545998 PCBP2Q15366 365 aaKnown RBP eCLIP19.59■□□□□ 0.738e-23■■■□□ 15.5
HMGA2-211ENST00000545998 TCTE1Q5JU00 501 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 METTL2BQ6P1Q9 378 aaKnown RBP19.59■□□□□ 0.73
HMGA2-211ENST00000545998 SLCO4C1Q6ZQN7 724 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 TMPRSS11BQ86T26 416 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 PROSER1Q86XN7 944 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 SNX31Q8N9S9 440 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 SARGQ9BW04 601 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 OPTCQ9UBM4 332 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 GRID1Q9ULK0 1009 aa19.59■□□□□ 0.73
HMGA2-211ENST00000545998 TNPO3Q9Y5L0 923 aaKnown RBP19.59■□□□□ 0.73
HMGA2-211ENST00000545998 KCNE1BA0A087WTH5 132 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 FEZF1A0PJY2 475 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 H0YGG7 62 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 STX16-NPEPL1H3BU86 382 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 STX16O14662 325 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 RGS16O15492 202 aaPredicted RBP19.58■□□□□ 0.73
HMGA2-211ENST00000545998 ZSCAN9O15535 394 aaPredicted RBP19.58■□□□□ 0.73
HMGA2-211ENST00000545998 ZNF749O43361 778 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 SIX3O95343 332 aaPredicted RBP19.58■□□□□ 0.73
HMGA2-211ENST00000545998 NTRK1P04629 796 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms