RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 IMPACTQ9P2X3 320 aa14.49□□□□□ -0.09
CLSTN3-216ENST00000545663 CHD3Q12873 2000 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 A0A0A6YYK5 440 aaPredicted RBP14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 NPIPA2E9PIF3 369 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 NPIPA3F8WFD2 350 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 CCL22O00626 93 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 AP2A1O95782 977 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 GYPCP04921 128 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 PRSS56P0CW18 603 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 SLC1A5Q15758 541 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 MUM1Q2TAK8 710 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 RTL6Q6ICC9 239 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 NPNTQ6UXI9 565 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 SULF2Q8IWU5 870 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 NIPA2Q8N8Q9 360 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 FAF2Q96CS3 445 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 MMABQ96EY8 250 aaPredicted RBP14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 CABS1Q96KC9 395 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 CYTH2Q99418 400 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 ZNF670Q9BS34 389 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 VN1R1Q9GZP7 353 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 CDCP1Q9H5V8 836 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 SYNPO2LQ9H987 977 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 MRPL47Q9HD33 250 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 LUC7LQ9NQ29 371 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 PLSCR2Q9NRY7 297 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 FAM153AQ9UHL3 310 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 FAM215AQ9Y5M1 114 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 MPDZO75970 2070 aa14.48□□□□□ -0.09
CLSTN3-216ENST00000545663 A0A1W2PPR1 153 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 LRRC53A6NM62 1247 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 AKR1B15C9JRZ8 316 aaPredicted RBP14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 CFAP99D6REC4 459 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 SYT5O00445 386 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 CD9P21926 228 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 ACVR2AP27037 513 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 SNRPNP63162 240 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 ZNF585AQ6P3V2 769 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 ARHGAP11AQ6P4F7 1023 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 PLD5Q8N7P1 536 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 OR13C4Q8NGS5 318 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 METTL21AQ8WXB1 218 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 OXNAD1Q96HP4 312 aaPredicted RBP14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 ZNF830Q96NB3 372 aaPredicted RBP14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 BDH2Q9BUT1 245 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 MKKSQ9NPJ1 570 aaPredicted RBP14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 INTS7Q9NVH2 962 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 ZNF407Q9C0G0 2248 aa14.47□□□□□ -0.09
CLSTN3-216ENST00000545663 HAX1O00165 279 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 DDX3XO00571 662 aaKnown RBP eCLIP14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 EPOP01588 193 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 SERPING1P05155 500 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 NFKB1P19838 968 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 PTPN3P26045 913 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 PSMB5P28074 263 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 TPP2P29144 1249 aaPredicted RBP14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 KLHL30Q0D2K2 578 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 MESDQ14696 234 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 POU4F3Q15319 338 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 PRTGQ2VWP7 1150 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 SLC25A35Q3KQZ1 300 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 TEX44Q53QW1 395 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 ZNF571Q7Z3V5 609 aaPredicted RBP14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 IPMKQ8NFU5 416 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 TEKT5Q96M29 485 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 DNAJC7Q99615 494 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 PLCD4Q9BRC7 762 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 ATG10Q9H0Y0 220 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 CDC14AQ9UNH5 594 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 PRSS21Q9Y6M0 314 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 ARID1AO14497 2285 aa14.46□□□□□ -0.09
CLSTN3-216ENST00000545663 IGLV3-16A0A075B6K0 115 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 A0A0A6YYC8 382 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 I3L1I5 382 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 FOXS1O43638 330 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 MFAP3LO75121 409 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 AGTP01019 485 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 TACR1P25103 407 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 TBX2Q13207 712 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 GRB7Q14451 532 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 HKDC1Q2TB90 917 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 FBXO42Q6P3S6 717 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 B3GNT6Q6ZMB0 384 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 POGLUT1Q8NBL1 392 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 C16orf52Q8NHV5 167 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 M1APQ8TC57 530 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 ZNF592Q92610 1267 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 ZUFSPQ96AP4 578 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 SLC22A18Q96BI1 424 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 ULK4Q96C45 1275 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 RNF157Q96PX1 679 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 MIPEPQ99797 713 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 ZFYVE21Q9BQ24 234 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 VPS37BQ9H9H4 285 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 ZDHHC3Q9NYG2 299 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 ANAPC7Q9UJX3 599 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 RUVBL1Q9Y265 456 aaKnown RBP14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 FAM169AQ9Y6X4 670 aa14.45□□□□□ -0.1
CLSTN3-216ENST00000545663 TARM1B6A8C7 271 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 H0YGG7 62 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms