RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CCNYL1Q8N7R7 359 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 ARMC2Q8NEN0 867 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 OR8K5Q8NH50 307 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 PPP1R14CQ8TAE6 165 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 FLVCR1-AS1Q8TAF5 88 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 MDM1Q8TC05 714 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 CCT6BQ92526 530 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 NEIL2Q969S2 332 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 CCDC126Q96EE4 140 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 ZNF578Q96N58 590 aaPredicted RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 SLC46A1Q96NT5 459 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 GPR78Q96P69 363 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 OR4K3Q96R72 315 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 PAIP2Q9BPZ3 127 aaKnown RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 ZFYVE21Q9BQ24 234 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 AIF1LQ9BQI0 150 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 PLCD4Q9BRC7 762 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 NDC1Q9BTX1 674 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 DDA1Q9BW61 102 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 ULBP3Q9BZM4 244 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 PELI2Q9HAT8 420 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 APMAPQ9HDC9 416 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 FAM60AQ9NP50 221 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 TXLNGQ9NUQ3 528 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 SIDT1Q9NXL6 827 aaKnown RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 EURLQ9NYK6 297 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 GPRC5BQ9NZH0 403 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 PTBP2Q9UKA9 531 aaKnown RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 B3GALT1Q9Y5Z6 326 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 DCHS1Q96JQ0 3298 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 A0A1W2PNU3 283 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 OR2A25A4D2G3 310 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 ANKDD1BA6NHY2 528 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 LRRC14BA6NHZ5 514 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 A8MT66 165 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 C9orf172C9J069 976 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 STMND1H3BQB6 276 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 STX16-NPEPL1H3BU86 382 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 TXNDC9O14530 226 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 STX16O14662 325 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 NVLO15381 856 aaKnown RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 RRP8O43159 456 aaKnown RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 NRP2O60462 931 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 PLIN3O60664 434 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SRPX2O60687 465 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 CPNE3O75131 537 aaKnown RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 SIX3O95343 332 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 STATHP02808 62 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 PROCP04070 461 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 NTRK1P04629 796 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 KLK3P07288 261 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 HBQ1P09105 142 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SLC35G6P0C7Q6 338 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 C1GALT1C1LP0DN25 315 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 PCNAP12004 261 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 FGF5P12034 268 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 MTHFD2P13995 350 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 CPA3P15088 417 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 H2AFXP16104 143 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 ALAS2P22557 587 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 VARSP26640 1264 aaKnown RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 GGT5P36269 586 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 ATP1A2P50993 1020 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 PCBP4P57723 403 aaKnown RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 ERVPABLB-1P60509 514 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 MAGOHP61326 146 aaKnown RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 CSNK1G2P78368 415 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SHC2P98077 582 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 FOXK2Q01167 660 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 CHIT1Q13231 466 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 LAPTM5Q13571 262 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SLBPQ14493 270 aaKnown RBP eCLIP6.05□□□□□ -1.44
LTBR-212ENST00000543542 GRM7Q14831 915 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 PCBP2Q15366 365 aaKnown RBP eCLIP6.05□□□□□ -1.44
LTBR-212ENST00000543542 FAM214AQ32MH5 1076 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.05□□□□□ -1.44
LTBR-212ENST00000543542 WASHC2DQ5SRD0 308 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 TTC19Q6DKK2 380 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 FRMPD2BQ6IN97 320 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 TLDC1Q6P9B6 456 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 UNQ6494/PRO21346Q6UXR6 183 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 LRRC69Q6ZNQ3 347 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 GOLGA7Q7Z5G4 137 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 EXOC3L1Q86VI1 746 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 ZFAND4Q86XD8 727 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 KLHDC8AQ8IYD2 350 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 IL22RA1Q8N6P7 574 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 CSNK1A1LQ8N752 337 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 BMPERQ8N8U9 685 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 ANKRD42Q8N9B4 389 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 BANPQ8N9N5 519 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 OR1L3Q8NH93 324 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 RDH11Q8TC12 318 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 TCP10LQ8TDR4 215 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 UBTD2Q8WUN7 234 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 PMEPA1Q969W9 287 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 ZNF501Q96CX3 271 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 PTCD3Q96EY7 689 aaKnown RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 PGM2Q96G03 612 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 NAF1Q96HR8 494 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms