RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CD84Q9UIB8 345 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 CMAHPQ9Y471 501 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 PEPDP12955 493 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 CD1DP15813 335 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 PGM2L1Q6PCE3 622 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 OSTM1Q86WC4 334 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 SLITRK4Q8IW52 837 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 ZNF599Q96NL3 588 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 PCYT2Q99447 389 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 NCKAP1Q9Y2A7 1128 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 ABHD14A-ACY1A0A1B0GW23 586 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 TRBC2A0A5B9 178 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 ELMOD2Q8IZ81 293 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 AQP11Q8NBQ7 271 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 RANBP9Q96S59 729 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 ZNF382Q96SR6 550 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 WACQ9BTA9 647 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 BEX2Q9BXY8 128 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 RIIAD1A6NNX1 92 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 CHURC1-FNTBB4DL54 471 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 RPP38P78345 283 aaKnown RBP18.84■□□□□ 0.61
SUDS3-204ENST00000543473 SYVN1Q86TM6 617 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 PHC2Q8IXK0 858 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 PJA1Q8NG27 643 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 VMP1Q96GC9 406 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 POPDC3Q9HBV1 291 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 IL1RAPQ9NPH3 570 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 PITPNM1O00562 1244 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 OXSR1O95747 527 aaPredicted RBP18.84■□□□□ 0.61
SUDS3-204ENST00000543473 CLDN10P78369 228 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 TMEM44Q2T9K0 475 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 BTBD16Q32M84 506 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 RHEBL1Q8TAI7 183 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 SUSD6Q92537 303 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 TTYH2Q9BSA4 534 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 PIGUQ9H490 435 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 MSRAQ9UJ68 235 aa18.84■□□□□ 0.61
SUDS3-204ENST00000543473 LRRC14BA6NHZ5 514 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 IGFBP4P22692 258 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 CPN2P22792 545 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 ACVRL1P37023 503 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 COQ5Q5HYK3 327 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 SMOQ99835 787 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 RDH8Q9NYR8 311 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 SEC14L4Q9UDX3 406 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 ZCWPW2A0A1B0GU75 182 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 SMIM30A4D0T7 59 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 SYN3O14994 580 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 DCLK1O15075 740 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 AKAP8O43823 692 aaKnown RBP18.83■□□□□ 0.61
SUDS3-204ENST00000543473 STBD1O95210 358 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 ACADMP11310 421 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 RPS3P23396 243 aaKnown RBP eCLIP18.83■□□□□ 0.61
SUDS3-204ENST00000543473 CPOXP36551 454 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 RPS24P62847 133 aaKnown RBP18.83■□□□□ 0.61
SUDS3-204ENST00000543473 PITPNAQ00169 270 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 CREB5Q02930 508 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 LARS2Q15031 903 aaKnown RBP18.83■□□□□ 0.61
SUDS3-204ENST00000543473 KIAA1161Q6NSJ0 714 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 PIWIL3Q7Z3Z3 882 aaKnown RBP18.83■□□□□ 0.61
SUDS3-204ENST00000543473 PIGKQ92643 395 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 TSGA13Q96PP4 275 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 OR51V1Q9H2C8 321 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 RNF11Q9Y3C5 154 aa18.83■□□□□ 0.61
SUDS3-204ENST00000543473 PRSS51A0A1B0GVH4 220 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 GNAO1P09471 354 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 RPL17P18621 184 aaKnown RBP18.83■□□□□ 0.6
SUDS3-204ENST00000543473 CD47Q08722 323 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 RUNDC3AQ59EK9 446 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 ZNF311Q5JNZ3 666 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 ATG9BQ674R7 924 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 SMARCD3Q6STE5 483 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 EBLN1P0CF75 366 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 CCND3P30281 292 aaPredicted RBP18.83■□□□□ 0.6
SUDS3-204ENST00000543473 CDK6Q00534 326 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 UCK2Q9BZX2 261 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 C20orf27Q9GZN8 174 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 MS4A12Q9NXJ0 267 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 EMCNQ9ULC0 261 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 TBC1D24Q9ULP9 559 aa18.83■□□□□ 0.6
SUDS3-204ENST00000543473 ZNF879B4DU55 563 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 HCN1O60741 890 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 TOMM5Q8N4H5 51 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 KLHL36Q8N4N3 616 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 CLDN19Q8N6F1 224 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 BPIFB1Q8TDL5 484 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 ZNF717Q9BY31 904 aaPredicted RBP18.82■□□□□ 0.6
SUDS3-204ENST00000543473 OR10H1Q9Y4A9 318 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 COL16A1Q07092 1604 aaPredicted RBP18.82■□□□□ 0.6
SUDS3-204ENST00000543473 DAPL1A0PJW8 107 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 ISM1B1AKI9 464 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 H1F0P07305 194 aaKnown RBP18.82■□□□□ 0.6
SUDS3-204ENST00000543473 CAPN3P20807 821 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 SEMA3AQ14563 771 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 CBX2Q14781 532 aaPredicted RBP18.82■□□□□ 0.6
SUDS3-204ENST00000543473 GPR33Q49SQ1 333 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 CYBRD1Q53TN4 286 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 C1orf52Q8N6N3 182 aaKnown RBP18.82■□□□□ 0.6
SUDS3-204ENST00000543473 OR5AK3PQ8NH89 298 aa18.82■□□□□ 0.6
SUDS3-204ENST00000543473 EFHD2Q96C19 240 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms