RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CHRNA6Q15825 494 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 C4orf46Q504U0 113 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ZNF678Q5SXM1 525 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 CDCA2Q69YH5 1023 aaPredicted RBP12.77□□□□□ -0.37
TNC-212ENST00000542877 OR2AJ1Q8NGZ0 328 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 NR4A3Q92570 626 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 HDAC2Q92769 488 aaKnown RBP12.77□□□□□ -0.37
TNC-212ENST00000542877 RIPOR3Q96MK2 946 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 TMEM74Q96NL1 305 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 HTATIP2Q9BUP3 242 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 TPT1P8Q9HAU6 139 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ELOA3DA6NLF2 546 aaPredicted RBP12.77□□□□□ -0.37
TNC-212ENST00000542877 OR2AT4A6NND4 320 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 BHMG1C9JSJ3 638 aaPredicted RBP12.77□□□□□ -0.37
TNC-212ENST00000542877 CPNE3O75131 537 aaKnown RBP12.77□□□□□ -0.37
TNC-212ENST00000542877 TBX18O95935 607 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 PRH1P02810 166 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 OR3A3P47888 321 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 OR3A2P47893 321 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ELOA3BQ3SY89 546 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 RABL3Q5HYI8 236 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 SYCE2Q6PIF2 218 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ELOA3Q8NG57 546 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ING5Q8WYH8 240 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 NKD1Q969G9 470 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 PSKH2Q96QS6 385 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ANKRD66B4E2M5 251 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 RB1P06400 928 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 ALPIP09923 528 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 ATP1B2P14415 290 aaPredicted RBP12.76□□□□□ -0.37
TNC-212ENST00000542877 AHCYP23526 432 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 PTGS2P35354 604 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 MAP3K8P41279 467 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 NUDT6P53370 316 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 TMBIM6P55061 237 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 INCA1Q0VD86 236 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 PUM1Q14671 1186 aaKnown RBP eCLIP12.76□□□□□ -0.37
TNC-212ENST00000542877 VITQ6UXI7 678 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 OR5AK3PQ8NH89 298 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 ZNF384Q8TF68 577 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 LRCH3Q96II8 777 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 CHMP1AQ9HD42 196 aaPredicted RBP12.76□□□□□ -0.37
TNC-212ENST00000542877 PEX10O60683 326 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 CYB5AP00167 134 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 BCHEP06276 602 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
TNC-212ENST00000542877 HK1P19367 917 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 ARSFP54793 590 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 BRAT1Q6PJG6 821 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 THOC6Q86W42 341 aaKnown RBP12.76□□□□□ -0.37
TNC-212ENST00000542877 SPAG16Q8N0X2 631 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 INO80EQ8NBZ0 244 aaPredicted RBP12.76□□□□□ -0.37
TNC-212ENST00000542877 DDX1Q92499 740 aaKnown RBP12.76□□□□□ -0.37
TNC-212ENST00000542877 TMEM203Q969S6 136 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 TMEM80Q96HE8 168 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 NDC1Q9BTX1 674 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 NEUROD4Q9HD90 331 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 LYARQ9NX58 379 aaKnown RBP12.76□□□□□ -0.37
TNC-212ENST00000542877 SPEF1Q9Y4P9 236 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 MAU2Q9Y6X3 613 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 ATRNL1Q5VV63 1379 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 A0A1W2PPW3 197 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 OR1I1O60431 355 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 RFPL1O75677 317 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 DNAJB5O75953 348 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 F7P08709 466 aaPredicted RBP12.76□□□□□ -0.37
TNC-212ENST00000542877 PRAMEF17Q5VTA0 474 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 HFE2Q6ZVN8 426 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 GALNT7Q86SF2 657 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 AQP11Q8NBQ7 271 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 NFKBIDQ8NI38 313 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 C17orf50Q8WW18 174 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 NPY6RQ99463 290 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 CDRT1O95170 752 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 RAB36O95755 333 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 KLK1P06870 262 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 CD83Q01151 205 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 ST3GAL3Q11203 375 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 TMEM17Q86X19 198 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 HERVK_113Q902F9 699 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 RIOK2Q9BVS4 552 aaKnown RBP12.76□□□□□ -0.37
TNC-212ENST00000542877 PREBQ9HCU5 417 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 PCDHGB6Q9Y5F9 930 aa12.76□□□□□ -0.37
TNC-212ENST00000542877 PRSS51A0A1B0GVH4 220 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 C5orf51A6NDU8 294 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SNAPC5O75971 98 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 C8AP07357 584 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 NDUFS1P28331 727 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 PDHA2P29803 388 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 APLP1P51693 650 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 PPP1R8Q12972 351 aaKnown RBP12.75□□□□□ -0.37
TNC-212ENST00000542877 LRRC32Q14392 662 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 SPANXN4Q5MJ08 99 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ARL9Q6T311 187 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 XKR5Q6UX68 686 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 NAPRTQ6XQN6 538 aa12.75□□□□□ -0.37
TNC-212ENST00000542877 ZNF782Q6ZMW2 699 aaPredicted RBP12.75□□□□□ -0.37
TNC-212ENST00000542877 PRR23CQ6ZRP0 262 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms